Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_D06
         (614 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   3.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   3.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   6.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   6.2  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 382 FSIAAIMARSAVERRSPDARSPPHTACLISP 474
           + +  I AR    + SP   +  HT+C+ +P
Sbjct: 331 YGVFNIRARRTGRKVSPRVNTIKHTSCIPTP 361


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 382 FSIAAIMARSAVERRSPDARSPPHTACLISP 474
           + +  I AR    + SP   +  HT+C+ +P
Sbjct: 331 YGVFNIRARRTGRKVSPRVNTIKHTSCIPTP 361


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 229 YCFNHILFFFKL 194
           Y F HI FFF +
Sbjct: 69  YAFTHIFFFFAI 80


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 393 GHHGSQRGRTAQSGRAFP 446
           GHH  Q    A + R+FP
Sbjct: 23  GHHHEQSAAAAAAYRSFP 40


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +2

Query: 314 TPSAGSREETGWWQKRERQELQTFRSRPSWLAAR*NGAVR 433
           T +    ++  +W+KR +      RSR +  A     A+R
Sbjct: 127 TTTQNKNDDPSYWEKRRKNNEAAKRSRDARRAKEDEIAIR 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,710
Number of Sequences: 336
Number of extensions: 2618
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)