BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_D06
(614 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023769-1|AAZ41777.1| 580|Drosophila melanogaster LP04777p pro... 30 2.9
BT022140-1|AAY51535.1| 660|Drosophila melanogaster IP01538p pro... 30 2.9
AY071236-1|AAL48858.1| 571|Drosophila melanogaster RE27439p pro... 30 2.9
AE014134-920|AAF52250.1| 580|Drosophila melanogaster CG6634-PA ... 30 2.9
AE014134-917|AAF52249.1| 660|Drosophila melanogaster CG6604-PA ... 30 2.9
AY094874-1|AAM11227.1| 147|Drosophila melanogaster RE41137p pro... 28 8.7
AE014135-64|AAN06527.1| 147|Drosophila melanogaster CG32850-PA ... 28 8.7
>BT023769-1|AAZ41777.1| 580|Drosophila melanogaster LP04777p
protein.
Length = 580
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 373 ATDFSIAAIMARSAVERRSPDARS 444
ATDFSIAAIMAR R RS
Sbjct: 38 ATDFSIAAIMAREDASSRESSIRS 61
>BT022140-1|AAY51535.1| 660|Drosophila melanogaster IP01538p
protein.
Length = 660
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +1
Query: 373 ATDFSIAAIMAR--SAVERRSPDARS 444
ATDFSIAAIMAR +A R P RS
Sbjct: 78 ATDFSIAAIMARGGNAPSSREPSERS 103
>AY071236-1|AAL48858.1| 571|Drosophila melanogaster RE27439p
protein.
Length = 571
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 373 ATDFSIAAIMARSAVERRSPDARS 444
ATDFSIAAIMAR R RS
Sbjct: 38 ATDFSIAAIMAREDASSRESSIRS 61
>AE014134-920|AAF52250.1| 580|Drosophila melanogaster CG6634-PA
protein.
Length = 580
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 373 ATDFSIAAIMARSAVERRSPDARS 444
ATDFSIAAIMAR R RS
Sbjct: 38 ATDFSIAAIMAREDASSRESSIRS 61
>AE014134-917|AAF52249.1| 660|Drosophila melanogaster CG6604-PA
protein.
Length = 660
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +1
Query: 373 ATDFSIAAIMAR--SAVERRSPDARS 444
ATDFSIAAIMAR +A R P RS
Sbjct: 78 ATDFSIAAIMARGGNAPSSREPSERS 103
>AY094874-1|AAM11227.1| 147|Drosophila melanogaster RE41137p
protein.
Length = 147
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 438 RVRTAPFYRAASHDGRDRKV--CSSCLSLFCHHPVSSRLPALGVFHIH 301
R+ + ++DG +K C C++ FC + LP + ++H++
Sbjct: 70 RIGLMQYLPIGTYDGSSKKARECVICMAEFCVNEAVRYLPCMHIYHVN 117
>AE014135-64|AAN06527.1| 147|Drosophila melanogaster CG32850-PA
protein.
Length = 147
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 438 RVRTAPFYRAASHDGRDRKV--CSSCLSLFCHHPVSSRLPALGVFHIH 301
R+ + ++DG +K C C++ FC + LP + ++H++
Sbjct: 70 RIGLMQYLPIGTYDGSSKKARECVICMAEFCVNEAVRYLPCMHIYHVN 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,675,545
Number of Sequences: 53049
Number of extensions: 497312
Number of successful extensions: 1296
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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