Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_D04
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 99 4e-21
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 80 2e-15
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 80 2e-15
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 79 4e-15
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 75 4e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 58 7e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 58 7e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 58 7e-09
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 54 1e-07
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 51 8e-07
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 51 8e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 51 1e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 51 1e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 50 3e-06
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 48 1e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 46 3e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 46 3e-05
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 45 5e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 45 5e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 45 5e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 45 7e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 45 7e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 43 2e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 43 2e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 43 2e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 40 0.002
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 40 0.002
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 39 0.005
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 38 0.006
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 38 0.008
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 38 0.011
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 38 0.011
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 38 0.011
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 36 0.025
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 36 0.033
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 36 0.044
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 33 0.18
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 33 0.18
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 1.2
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 3.8
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 3.8
Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein. 29 5.0
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 5.0
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 28 8.8
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 98.7 bits (235), Expect = 4e-21
Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Frame = +1
Query: 460 SVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQ 639
+V ++ E D + S N +T+ G+ +P P + + P I L + KPTVIQS
Sbjct: 100 AVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHELLYGK-FQKPTVIQSI 158
Query: 640 GWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHI-KENKAKKGRGPXVLVLAP 792
WPIA+SG++ + IA+TG+GKTLAF+LPA+VHI K+ ++G GP VLVL P
Sbjct: 159 SWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLP 210
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 80.2 bits (189), Expect = 2e-15
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Frame = +1
Query: 409 QILKGTKLRELQILRFYSVKTEQKKEDDDY---RSDNSITVIGQDIPSPFVDIEASGFPE 579
++ KG K E + + +++ +DY R I+ G IP P FP+
Sbjct: 139 ELTKGEKYEEPIVTAWRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPK 198
Query: 580 YIKTFL-KMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKAK 756
+ F+ K +GI PT IQ QG P+ALSG++ +GIA TG+GKT+ F+LP V+ E + K
Sbjct: 199 SLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMK 258
Query: 757 ----KGRGPXVLVLAP 792
+ GP L++ P
Sbjct: 259 LPFMRSEGPFGLIIVP 274
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 79.8 bits (188), Expect = 2e-15
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Frame = +1
Query: 463 VKTEQKKEDDDYRSD-NSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQ 639
++ K E YR + +SITV G D P P G + LK +KPT IQ+Q
Sbjct: 274 IRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQ 333
Query: 640 GWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKEN-KAKKGRGPXVLVLAP 792
P +SG++ +GIA+TG+GKTLAFLLP HI + + ++G GP ++LAP
Sbjct: 334 AIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAP 385
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 79.0 bits (186), Expect = 4e-15
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Frame = +1
Query: 451 RFYSVKTEQKKEDDD---YRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKP 621
R + +K + D D +R D +I++ G +P P + E +GFP+ + +K G +P
Sbjct: 265 RHWRMKELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEP 324
Query: 622 TVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHI-----KENKAKKGRGPXVLVL 786
T IQ Q PI L ++ +G+A+TG+GKT AFLLP +V I E + + GP +++
Sbjct: 325 TPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIM 384
Query: 787 AP 792
AP
Sbjct: 385 AP 386
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 75.4 bits (177), Expect = 4e-14
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
Frame = +1
Query: 535 IPSPFVDIE-ASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLA 711
IP P E A G I ++ G KP+ IQSQ WP+ LSG++ +G++QTG+GKTLA
Sbjct: 78 IPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLA 137
Query: 712 FLLPAVVHI-------KENKAKKGRGPXVLVLAP 792
FLLPA++HI ++N ++ P VLVL+P
Sbjct: 138 FLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSP 171
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +1
Query: 511 SITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQT 690
++ V G P P F + + ++ +PT IQ+ P ALSG++ +GIA+T
Sbjct: 252 NLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKT 311
Query: 691 GTGKTLAFLLPAVVHIKEN-KAKKGRGPXVLVLAP 792
G+GKT A+L PA+VHI + K G GP +++ P
Sbjct: 312 GSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVP 346
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 514 ITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTG 693
+ V G +P+ +GF + + G +KPT +Q P L+ ++ + AQTG
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 186
Query: 694 TGKTLAFLLPAVVHI 738
+GKT AFLLP + HI
Sbjct: 187 SGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 514 ITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTG 693
+ V G +P+ +GF + + G +KPT +Q P L+ ++ + AQTG
Sbjct: 111 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 170
Query: 694 TGKTLAFLLPAVVHI 738
+GKT AFLLP + HI
Sbjct: 171 SGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +1
Query: 514 ITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTG 693
+ V G +P+ +GF + + G +KPT +Q P L+ ++ + AQTG
Sbjct: 108 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 167
Query: 694 TGKTLAFLLPAVVHI 738
+GKT AFLLP + HI
Sbjct: 168 SGKTAAFLLPIIQHI 182
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +1
Query: 514 ITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTG 693
+ G D+P P E+I+ +K G +PT +Q P G++ + AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 694 TGKTLAFLLPAV 729
+GKT AFL+P V
Sbjct: 214 SGKTAAFLVPLV 225
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/98 (32%), Positives = 45/98 (45%)
Frame = +1
Query: 463 VKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQG 642
V+ +K DD R N I G +P+ + S + L I +P+ IQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 643 WPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKAK 756
P +N + A TG+GKTLAF LP + I E K +
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQR 194
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 51.2 bits (117), Expect = 8e-07
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +1
Query: 472 EQKKEDDDYRSDNSITVIGQDIP-SPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWP 648
E ++E ++S T + + + + F +E +K + G T T IQ++
Sbjct: 42 EVEEEQKHQTEESSETKVSEFLTKTTFASLEGKVNANLLKAVQGL-GFTTMTEIQAKSID 100
Query: 649 IALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKAKKGRGPXVLVLAP 792
L GK+ + A+TG+GKTLAFLLPA+ + + K+ G V++++P
Sbjct: 101 PLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSP 148
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 51.2 bits (117), Expect = 8e-07
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Frame = +1
Query: 409 QILKGTKLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPF-VDIEASGFPEYI 585
Q L G + R+ + S K+++ +E++D+ S + G+ + + V E I
Sbjct: 103 QQLGGKETRDTVREKRKSGKSKKSQENEDFFS---ALIDGKSLDTSVNVSFEQMNLSRQI 159
Query: 586 KTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKAKKGR 765
G + PT IQ P+AL+GK+ A TGTGKT AF+LP ++ + K
Sbjct: 160 LKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLP-ILERMIYRPKGAS 218
Query: 766 GPXVLVLAP 792
VLVL P
Sbjct: 219 CTRVLVLVP 227
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Frame = +1
Query: 505 DNSITVIGQDIP---SPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFV 675
D S+ ++ + P P S P+ ++ ++ G T+ T IQ P+ GK+ +
Sbjct: 280 DASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDIL 339
Query: 676 GIAQTGTGKTLAFLLPAVVHIKENK-----AKKGRGPXVLVLAP 792
AQTG+GKT AFLLP + + K A+ G P ++L P
Sbjct: 340 ACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTP 383
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Frame = +1
Query: 505 DNSITVIGQDIP---SPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFV 675
D S+ ++ + P P S P+ ++ ++ G T+ T IQ P+ GK+ +
Sbjct: 280 DASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDIL 339
Query: 676 GIAQTGTGKTLAFLLPAVVHIKENK-----AKKGRGPXVLVLAP 792
AQTG+GKT AFLLP + + K A+ G P ++L P
Sbjct: 340 ACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTP 383
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Frame = +1
Query: 574 PEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFV-GIAQTGTGKTLAFLLPAVVHI---- 738
P + ++ G ++PT IQS P A+ + V G A+TG+GKTLAF +P V +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 739 ---KENKAKKGRGPXVLVLAP 792
+E ++ + RGP L++AP
Sbjct: 223 DDSQETESTEVRGPRALIVAP 243
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 48.4 bits (110), Expect = 6e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 568 GFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVH-IKE 744
G E I + G K +Q +AL KN +G A+TG+GKT AFL+P V I E
Sbjct: 95 GLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAE 154
Query: 745 NKAKKGR-GPXVLVLAP 792
+K G GP +++AP
Sbjct: 155 SKTNDGSVGPSAVIIAP 171
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +1
Query: 595 LKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKAKKGRGPX 774
LK TKPT IQ +L+G + VG A+TG+GKTLA ++P + + K G
Sbjct: 91 LKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLG 150
Query: 775 VLVLAP 792
L+++P
Sbjct: 151 ALIISP 156
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +1
Query: 574 PEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKA 753
P+ + LK + +PT IQ + + G + V A TG+GKTLAFL+P V+ + E
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 754 K------KGRGPXVLVLAP 792
K + P +L++AP
Sbjct: 804 KDRDVTDEKPSPRLLIVAP 822
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +1
Query: 574 PEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKA 753
P+ + LK + +PT IQ + + G + V A TG+GKTLAFL+P V+ + E
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 754 K------KGRGPXVLVLAP 792
K + P +L++AP
Sbjct: 804 KDRDVTDEKPSPRLLIVAP 822
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +1
Query: 607 GITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAV 729
G KP+ IQ P AL GK+ +G+A+TG+GKT AF +P +
Sbjct: 63 GWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 577 EYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVH-IKENKA 753
E +K + G TK T IQ P+ G + + AQTG+GKT AFLLP + I EN
Sbjct: 561 ETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDL 620
Query: 754 K-KGRG---PXVLVLAP 792
G G P ++L P
Sbjct: 621 NTAGEGGCYPRCIILTP 637
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 577 EYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVH-IKENKA 753
E +K + G TK T IQ P+ G + + AQTG+GKT AFLLP + I EN
Sbjct: 561 ETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDL 620
Query: 754 K-KGRG---PXVLVLAP 792
G G P ++L P
Sbjct: 621 NTAGEGGCYPRCIILTP 637
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 577 EYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVH-IKENKA 753
E +K + G TK T IQ P+ G + + AQTG+GKT AFLLP + I EN
Sbjct: 561 ETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDL 620
Query: 754 K-KGRG---PXVLVLAP 792
G G P ++L P
Sbjct: 621 NTAGEGGCYPRCIILTP 637
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Frame = +1
Query: 613 TKPTVIQSQGWPIALSGKNFV-GIAQTGTGKTLAFLLPAVVHI-------KENKAKKGRG 768
++PT IQS P A+ + V G A+TG+GKTLAF +P V + +E ++ + RG
Sbjct: 9 SEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRG 68
Query: 769 PXVLVLAP 792
P L++AP
Sbjct: 69 PRALIVAP 76
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +1
Query: 568 GFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIK 741
G + ++ +G +PT IQ + P + GK+ V +++TG+GKT AF++P + +K
Sbjct: 30 GLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLK 87
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +1
Query: 568 GFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIK 741
G + ++ +G +PT IQ + P + GK+ V +++TG+GKT AF++P + +K
Sbjct: 30 GLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLK 87
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 44.4 bits (100), Expect = 9e-05
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = +1
Query: 466 KTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGW 645
+T + D D D ++ + + SG I LK IQ
Sbjct: 353 ETADRLADCDVGQDRAVEIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMI 412
Query: 646 PIALSGKNFVGIAQTGTGKTLAFLLPAVVHI------KENKAKKGRGPXVLVLAP 792
P L G + +G A+T GKT AF LP + I NKA++ GP L+LAP
Sbjct: 413 PQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAP 467
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 607 GITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHI--KENKAKKGRG---P 771
G +K T IQ P+ G + + AQTG+GKT AFLLP + + N G G P
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYP 419
Query: 772 XVLVLAP 792
++L P
Sbjct: 420 RCIILTP 426
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 607 GITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHI--KENKAKKGRG---P 771
G +K T IQ P+ G + + AQTG+GKT AFLLP + + N G G P
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYP 419
Query: 772 XVLVLAP 792
++L P
Sbjct: 420 RCIILTP 426
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 607 GITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHI--KENKAKKGRG---P 771
G +K T IQ P+ G + + AQTG+GKT AFLLP + + N G G P
Sbjct: 360 GYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYP 419
Query: 772 XVLVLAP 792
++L P
Sbjct: 420 RCIILTP 426
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +1
Query: 568 GFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLP 723
G +I L+ I T +Q+ P L G + +G A+TGTGKTLAF +P
Sbjct: 95 GVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIP 146
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +1
Query: 568 GFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLP 723
G +I L+ I T +Q+ P L G + +G A+TGTGKTLAF +P
Sbjct: 95 GVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIP 146
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 652 ALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKAKKGRGPXVLVLAP 792
AL GKN V +A TG+GKT + A+ HI+E + +G+ V++L P
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEE-RTSQGKPSRVVLLVP 427
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 613 TKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENK 750
T PT +QS+ P L G + + A+TG+GKT AF LP + E +
Sbjct: 23 TLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQIVWERR 68
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +1
Query: 472 EQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPI 651
E KK++DD + + + S + G E + + G KP+ IQ + P
Sbjct: 3 ENKKKNDDMAT---VEFESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPA 59
Query: 652 ALSGKNFVGIAQTGTGKTLAF 714
L ++ + AQ+GTGKT F
Sbjct: 60 ILKARDVIAQAQSGTGKTATF 80
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +1
Query: 595 LKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHI 738
LK +P+ +Q++ P+ L G++ + A++GTGKTL F + AV ++
Sbjct: 37 LKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENL 84
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +1
Query: 595 LKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHI 738
LK +P+ +Q++ P+ L G++ + A++GTGKTL F + AV ++
Sbjct: 37 LKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENL 84
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 604 QGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIK 741
+G KP+ IQ +AL+G++ + A+ GTGKT A+ +P + I+
Sbjct: 61 KGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQ 106
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 36.3 bits (80), Expect = 0.025
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +1
Query: 505 DNSITVIGQDIPSPFVDI----EASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSG--K 666
D + V QD SP I E PE +K L PT IQ P+ L
Sbjct: 191 DVVVDVQRQDPKSPLYSISSFRELRLKPEVLKA-LDTMNFQFPTRIQETALPLLLMEPPS 249
Query: 667 NFVGIAQTGTGKTLAFLLPAVVHIKEN 747
N + AQ+GTGKT AF+L + I N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVN 276
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 36.3 bits (80), Expect = 0.025
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +1
Query: 505 DNSITVIGQDIPSPFVDI----EASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSG--K 666
D + V QD SP I E PE +K L PT IQ P+ L
Sbjct: 216 DVVVDVQRQDPKSPLYSISSFRELRLKPEVLKA-LDTMNFQFPTRIQETALPLLLMEPPS 274
Query: 667 NFVGIAQTGTGKTLAFLLPAVVHIKEN 747
N + AQ+GTGKT AF+L + I N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVN 301
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 36.3 bits (80), Expect = 0.025
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +1
Query: 505 DNSITVIGQDIPSPFVDI----EASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSG--K 666
D + V QD SP I E PE +K L PT IQ P+ L
Sbjct: 600 DVVVDVQRQDPKSPLYSISSFRELRLKPEVLKA-LDTMNFQFPTRIQETALPLLLMEPPS 658
Query: 667 NFVGIAQTGTGKTLAFLLPAVVHIKEN 747
N + AQ+GTGKT AF+L + I N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVN 685
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 35.9 bits (79), Expect = 0.033
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +1
Query: 460 SVKTEQKKEDDDYRSDNSI-TVIGQDIPSPF-VD-IEASGFPEY-IKTFLKMQGITKPTV 627
S K E D + + I T G D+P + D I A+ + I LK +T
Sbjct: 59 SAKAESSMIDKFCKENTRIQTNPGIDLPDDYGTDAIVANAIGDQRIVNNLKCVHVTTFNA 118
Query: 628 IQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENK 750
+Q + G+ V A TG GKT AFL+PA+ +N+
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNR 159
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 35.5 bits (78), Expect = 0.044
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 607 GITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAF 714
G KP+ IQ + P L ++ + AQ+GTGKT F
Sbjct: 45 GFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATF 80
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 607 GITKPTV--IQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENK 750
G+TK +Q + G+ V A TG GKT AFL+PA+ EN+
Sbjct: 10 GVTKTVKRRVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENR 59
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 607 GITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAF 714
G KP+ IQ + +GK+ + AQ+GTGKT F
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 607 GITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAF 714
G KP+ IQ + +GK+ + AQ+GTGKT F
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 574 PEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKA 753
P I T+ +Q P++ P L ++ A TG+GKT+ ++LP + + +
Sbjct: 127 PSAISTWFPVQYAVLPSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPS 186
Query: 754 K 756
K
Sbjct: 187 K 187
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +1
Query: 394 SILHNQILKGTKLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGF 573
S+LH+ +L+ R ++ F+S+ KE Y +++ I+ + Q S + + +
Sbjct: 442 SLLHHPVLQEPTARSVECFYFHSMLASPMKEIIHYHANDKISDVLQRFISLYHTSQEAED 501
Query: 574 PEYIKTFLK 600
+YI F K
Sbjct: 502 KKYIMMFTK 510
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 649 IALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKAKKGRGPXVLVLAP 792
+AL GKN + A TG+GKT+ H E+++ +G+ L + P
Sbjct: 303 VALQGKNTIVTAPTGSGKTVIAANIIKEHF-ESRSSEGKRFKALFMTP 349
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 649 IALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKAKKGRGPXVLVLAP 792
+AL GKN + A TG+GKT+ H E+++ +G+ L + P
Sbjct: 303 VALQGKNTIVTAPTGSGKTVIAANIIKEHF-ESRSSEGKRFKALFMTP 349
>Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical
protein C23H4.1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 427 KLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEY 582
K+ + +L++Y + EQ K+DD Y + +P+ F + E E+
Sbjct: 90 KINKEDLLKYYGKEVEQYKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEH 141
>AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 427 KLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEY 582
K+ + +L++Y + EQ K+DD Y + +P+ F + E E+
Sbjct: 90 KINKEDLLKYYGKEVEQYKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEH 141
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +1
Query: 463 VKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQG 642
VK+E KE+++ +D ++T+ PS DI+ P + ++ Q IT P ++
Sbjct: 34 VKSEVVKEEENDDADRTLTM-----PSTSQDIQPESSPAHGRSAPSSQEITSPPTVRRVA 88
Query: 643 WPIALSGKNF 672
P+ + + +
Sbjct: 89 TPLEAAEQEY 98
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 688 TGTGKTLAFLLPAVVH 735
TG GK+L + LPAVVH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 688 TGTGKTLAFLLPAVVHIKENKAKKGRGPXVLVLAP 792
TG+GKTLAF+LP ++ + +N + L+L+P
Sbjct: 55 TGSGKTLAFVLP-MMRMIQNAKLQPADIGALILSP 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,783,591
Number of Sequences: 27780
Number of extensions: 339694
Number of successful extensions: 869
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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