Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C24
         (853 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9UNL2 Cluster: Translocon-associated protein subunit g...   212   8e-54
UniRef50_Q95XS1 Cluster: Putative uncharacterized protein; n=2; ...   137   3e-31
UniRef50_Q5D974 Cluster: SJCHGC01752 protein; n=2; Schistosoma j...   120   5e-26
UniRef50_Q29330 Cluster: Translocon associated protein gamma cha...    84   5e-15
UniRef50_Q55GT5 Cluster: Putative uncharacterized protein; n=1; ...    67   5e-10
UniRef50_Q555U9 Cluster: Putative uncharacterized protein; n=2; ...    36   0.98 
UniRef50_A6P625 Cluster: Asparagine synthetase; n=1; Microcystis...    35   3.0  
UniRef50_Q5UYE7 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_O41953 Cluster: Kinase; n=1; Murid herpesvirus 4|Rep: K...    33   9.1  
UniRef50_Q22C53 Cluster: Putative uncharacterized protein; n=1; ...    33   9.1  

>UniRef50_Q9UNL2 Cluster: Translocon-associated protein subunit
           gamma; n=36; Eumetazoa|Rep: Translocon-associated
           protein subunit gamma - Homo sapiens (Human)
          Length = 185

 Score =  212 bits (518), Expect = 8e-54
 Identities = 100/168 (59%), Positives = 128/168 (76%), Gaps = 2/168 (1%)
 Frame = +2

Query: 122 MSGKNNKAFTKEEXLLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAII 301
           M+ K +     EE LLLQDFSRN+S KSSALF+GNAFIVSAIPIWL+WR+  +++  + +
Sbjct: 1   MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAV 60

Query: 302 WFILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKL--ADDKKMSRKEKDER 475
            + ++T  ST+L+A AY+N KF LKH             ++RKL  AD++KMSRKEKDER
Sbjct: 61  LYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDER 120

Query: 476 ILWKKNEVADYEATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYIV 619
           ILWKKNEVADYEATT+SIFYNN LFL +VI++SF+IL+ F PTVNYI+
Sbjct: 121 ILWKKNEVADYEATTFSIFYNNTLFLVVVIVASFFILKNFNPTVNYIL 168


>UniRef50_Q95XS1 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 178

 Score =  137 bits (332), Expect = 3e-31
 Identities = 67/157 (42%), Positives = 100/157 (63%)
 Frame = +2

Query: 149 TKEEXLLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAAS 328
           TKEE LLL  +S   STK +  FY NA I+S  P++LF+ VH +EI  +++ + L    +
Sbjct: 5   TKEEELLLSSYSATSSTKGNLFFYLNALIISIAPLYLFYGVHQMEIQDSLVVWGLSAVGT 64

Query: 329 TWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERILWKKNEVADY 508
            +LL+LA +N K  LKH             +S + A DKKM+ KEK+ER L++KNEVAD 
Sbjct: 65  AYLLSLACKNQKCLLKHQIVMKRGSAVEREISGQYAADKKMTVKEKEERALFRKNEVADT 124

Query: 509 EATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYIV 619
           E+T  S+FY N+L+LTI+++S+F++L    P  N ++
Sbjct: 125 ESTYLSVFYTNSLYLTIMLVSAFFLLANVAPVFNLLI 161


>UniRef50_Q5D974 Cluster: SJCHGC01752 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC01752 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 173

 Score =  120 bits (289), Expect = 5e-26
 Identities = 55/142 (38%), Positives = 91/142 (64%)
 Frame = +2

Query: 149 TKEEXLLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAAS 328
           TKE+  LL+++S+  S  S  L Y NA ++S+IPIWLF+ VH + +    + F +++ AS
Sbjct: 6   TKEDERLLEEYSQAASKSSEKLVYVNAIMISSIPIWLFFGVHKMPLVANSVLFAIISLAS 65

Query: 329 TWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERILWKKNEVADY 508
           T+L++LAY+N+K  L               ++ +   DKK+S+K +++ +  +  +VADY
Sbjct: 66  TFLMSLAYKNSKAPLMERIAIRRTEAITKEVNSEACKDKKLSKKNREDIVRERTKKVADY 125

Query: 509 EATTYSIFYNNALFLTIVILSS 574
           E+TT+SIFYNN LFL +++L S
Sbjct: 126 ESTTFSIFYNNCLFLLLLLLLS 147


>UniRef50_Q29330 Cluster: Translocon associated protein gamma chain;
           n=2; Laurasiatheria|Rep: Translocon associated protein
           gamma chain - Sus scrofa (Pig)
          Length = 77

 Score = 83.8 bits (198), Expect = 5e-15
 Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
 Frame = +2

Query: 284 ISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKL--ADDKKMSR 457
           I +A+++ ++ T  ST+L+A AY+N KF LKH             ++RKL  AD++KMSR
Sbjct: 1   IQSAVLYSVM-TLVSTYLVAXAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSR 59

Query: 458 KEKDERILWKKNEVADYE 511
           KEKDERILWKKNEVADYE
Sbjct: 60  KEKDERILWKKNEVADYE 77


>UniRef50_Q55GT5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 170

 Score = 67.3 bits (157), Expect = 5e-10
 Identities = 40/144 (27%), Positives = 70/144 (48%)
 Frame = +2

Query: 188 NVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKF 367
           +VS +   +++ N+ IV+ +P++L+  +  + I   +I +  VT  +  +L  AY N  +
Sbjct: 15  DVSIEQRIVYFINSLIVALVPVYLYHAIFFMSIDDHMIIYGSVTLFAAIVLTFAYNNI-Y 73

Query: 368 QLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERILWKKNEVADYEATTYSIFYNNAL 547
           ++K                 K+ D KK +  +K+ + L     V  +EA   SI YNNA+
Sbjct: 74  RMKRLKLSASREHISIASKNKVGDKKKFAAAQKEVQAL-----VTSHEAIAASIMYNNAV 128

Query: 548 FLTIVILSSFYILRTFTPTVNYIV 619
           FL  V + SF I +      NYI+
Sbjct: 129 FLICVSIFSFIIFKNVPLVYNYII 152


>UniRef50_Q555U9 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 337

 Score = 36.3 bits (80), Expect = 0.98
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = -1

Query: 742 CHSMSKMFNIKTVCITWRIKLPSSLGSCGE-*SKKSRCSRERHNVINCRCECTQNVETAQ 566
           C   ++  + K  CI   +K+P+  G+C E  S  S C +++ N  NC  E    ++   
Sbjct: 216 CSDNTQCISDKAQCICDSVKVPTGPGTCQEIYSIGSTCKKDKLNYYNCIAESNCPLQVT- 274

Query: 565 DDNSQEKCV 539
           + NS E C+
Sbjct: 275 NKNSNETCI 283


>UniRef50_A6P625 Cluster: Asparagine synthetase; n=1; Microcystis
           aeruginosa|Rep: Asparagine synthetase - Microcystis
           aeruginosa
          Length = 622

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +1

Query: 115 SKNVWKEQQSFYKRRXVIVARF*PECVHKIVCSLLRERFYCFSNSNLVVLEGTFIGNKH- 291
           S  VW + Q FY+R          E    +  + LRE+FY F   N  V++   I N+H 
Sbjct: 409 SLKVWGDNQLFYERNLYAYQ----ETKLALYSAKLREQFYQFDCLNFEVVDHEKIKNRHH 464

Query: 292 ---RNYLVYPSNGS*HLVA 339
              R+YL +    S HLVA
Sbjct: 465 LHKRSYLDFKLRLSDHLVA 483


>UniRef50_Q5UYE7 Cluster: Putative uncharacterized protein; n=1;
           Haloarcula marismortui|Rep: Putative uncharacterized
           protein - Haloarcula marismortui (Halobacterium
           marismortui)
          Length = 419

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +2

Query: 182 SRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNT 361
           +RN  +  +A  Y +   V++ P WL WR +SL       +F L  A   WL+   Y++T
Sbjct: 281 TRNGQSVDTARTYRSGPSVASAPAWLPWRRYSLVYGRTTDYFTLTDAERRWLV---YKST 337

Query: 362 K 364
           +
Sbjct: 338 R 338


>UniRef50_O41953 Cluster: Kinase; n=1; Murid herpesvirus 4|Rep:
           Kinase - Murid herpesvirus 4 (MuHV-4) (Murine
           gammaherpesvirus 68)
          Length = 437

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 585 CVHSHLQLITLCLSRLH---LDFLLYSPQEPSEDGSLMRHVIQTVLILNILDILWQLKI 752
           C++   Q   LC++ L    LDFL  SP  P   G  + +++Q  ++   +  +W L +
Sbjct: 302 CLYYSFQDCLLCMAGLQYRGLDFLKVSPPPPDRPGKYLAYMMQRTVVTQFICGVWGLSV 360


>UniRef50_Q22C53 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1512

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = -1

Query: 703 CITWRIKLPSSLGSCGE*SKKSRCSRERHNVINCRCECTQN--VETAQDDNSQEKCVIVE 530
           C+  ++ LP S+ + G   K S+C +E  N +    +C Q+  +++  DD   + C +++
Sbjct: 554 CLLNQVCLPLSIQNPGREDKTSKCLQEGENGVFGAIQCFQSFCLKSTSDDTQDQYCALID 613


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,484,322
Number of Sequences: 1657284
Number of extensions: 14625899
Number of successful extensions: 34934
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 33605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34917
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)