Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_C22
(889 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 2e-37
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 97 2e-20
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 35 0.077
SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05) 30 2.9
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 29 5.0
SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 28 8.8
SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21) 28 8.8
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_27146| Best HMM Match : LIM (HMM E-Value=9.7) 28 8.8
SB_21674| Best HMM Match : LIM (HMM E-Value=0.44) 28 8.8
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 153 bits (370), Expect = 2e-37
Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 1/206 (0%)
Frame = +3
Query: 132 EVVIASAVXTPMGSFRXXXXXXXXXXXXXXXXNAAIERAGIPKEEIKEVYIGNVCSANLG 311
+V+IA AV TP+GS A+ RA I ++ EV +G V +A G
Sbjct: 9 DVIIACAVRTPVGSHNGDLSSLKAHELGSIVVKEALCRASISPCDVSEVILGQVLTAGQG 68
Query: 312 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 491
Q PARQA I AG+P VN +C SG+K++ L Q + G +I++AGG ESMS P
Sbjct: 69 QGPARQAAIHAGIPACVPAYGVNMLCGSGLKAVALGYQAVAMGDSNIVVAGGQESMSQAP 128
Query: 492 FYL-KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSY 668
R +G M L+D ++ DGL D +N +HMG AEN AK+ +++R++QD +A+ S
Sbjct: 129 HCCHMRPALKFGDMTLIDTMLKDGLMDSFNNYHMGITAENVAKQWEVSREEQDNFALTSQ 188
Query: 669 KRSAAAYEAKAFVDELVPVPVPQKRG 746
+R+ A +A F DE+V V + + G
Sbjct: 189 QRTETAQKAGYFSDEIVTVSIKTRAG 214
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 836 GTVTAGNASTLNDGAA 883
GTV+AGN S LNDGAA
Sbjct: 246 GTVSAGNTSGLNDGAA 261
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 96.7 bits (230), Expect = 2e-20
Identities = 43/82 (52%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Frame = +3
Query: 591 GNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAE 767
G CAEN A K ITR++QD+YA++SY+R+AAA++A F E+VPV +PQK+G P ++F E
Sbjct: 59 GVCAENAASKYNITREEQDDYAIHSYRRTAAAWDAGKFKQEVVPVNIPQKKGKPDIVFEE 118
Query: 768 DEEYKRVXFEKLQNCLRYSKRK 833
DEEYK+V FEK + K++
Sbjct: 119 DEEYKKVSFEKFPSLKTVFKKE 140
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 11/60 (18%)
Frame = +3
Query: 306 LGQAPARQAVIFAG-----------LPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 452
+GQAPARQA + AG LP ST CTT+NKVCASGMKSIM AAQ L G+Q +
Sbjct: 1 MGQAPARQAALGAGTRXVTSIRDQALPISTPCTTINKVCASGMKSIMAAAQSLMCGSQGV 60
Score = 51.6 bits (118), Expect = 8e-07
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = +2
Query: 782 KSXF*KVTKLSTVFQKENGTVTAGNASTLNDGAAXL 889
K F K L TVF+KENGTVTA NASTLNDGAA +
Sbjct: 124 KVSFEKFPSLKTVFKKENGTVTAANASTLNDGAAAV 159
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 70.1 bits (164), Expect = 2e-12
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +3
Query: 525 GMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAF 704
G Q+ D + + GLTD+ MG AEN A+K ITR++ D++A+ S +R AAA+E+ AF
Sbjct: 799 GAQMEDTL-WQGLTDMLPGLPMGITAENLAEKYNITREECDQFALLSQQRWAAAHESGAF 857
Query: 705 VDELVPVPVPQKRGAPVIFAEDE 773
E+VPVPV K+G P FA DE
Sbjct: 858 TAEIVPVPVKGKKG-PEQFAVDE 879
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 797 KVTKLSTVFQKENGTVTAGNAS 862
++ KL VF+K NGTV+AGNAS
Sbjct: 889 QLAKLPAVFKK-NGTVSAGNAS 909
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 35.1 bits (77), Expect = 0.077
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 588 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDEL 716
MG+ A+ A ++RQ+QDEYA+ S+ + A +A D L
Sbjct: 13 MGHSADRLASAFHVSRQEQDEYALRSHTLAHQATQAGKLTDVL 55
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 797 KVTKLSTVFQKENGTVTAGNASTLNDGAA 883
++ KL F + GT+TA N+S L DGA+
Sbjct: 79 QMAKLKPAFIRPFGTITAANSSFLTDGAS 107
>SB_57005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 533 LHSSIRSFTSLQIKRYI*HRFHPTSKYYILGSSL*TLCCQ-HYRFHARGTYFVYSCTYGT 357
+HS+ R+ + RY H T + S+ TLC Q H R+ + T+ +YS T+
Sbjct: 102 MHSNTRTLCTKTHARYALKHTHTT-----MHSNTRTLCTQTHARYALKHTHTMYSNTHTL 156
Query: 356 FWQTCKYYSL 327
QT +Y+L
Sbjct: 157 CTQTHAHYAL 166
>SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1433
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+VFD ++ + M C+ N K + +Q E+ +Y R +A A
Sbjct: 1214 DGVVFDAAIELAHPSDMWVCSTN--KMGALVQQRLIEHHRKNYPRLSATIRFDPDPSVAH 1271
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRG V
Sbjct: 1272 RYRKQERPVPVPGKRGEKV 1290
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Frame = +3
Query: 537 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE--AKAFVD 710
V GIV +TD ++ H + T D E Y S +Y K F
Sbjct: 575 VSGIVEQRVTDGTDEIHSTDVNLAKYNLPDGTIGDHTESIKIYYDPSIVSYRHLLKVFWS 634
Query: 711 ELVPVPVPQKRGAPVIFAEDEEYKRVXFEKLQNCLRYSKRK 833
P V ++ VIF +E +R E L+N R K K
Sbjct: 635 IHDPTEVQTRQYRSVIFVHNESQRRQAIESLENARRRVKGK 675
>SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 284 WQCLFCKFGPSTCKTSCNICRFAKKY-HMYNCK-QSMCLWHEIYNVGSTR 427
W+C K PS ++ + F KKY H + +S LW+ Y + + R
Sbjct: 80 WECEHVKPVPSDVRSKMRLSGFYKKYLHAFGIPVRSNTLWYRTYAMSTDR 129
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 28.3 bits (60), Expect = 8.8
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + + +M C+ N L +Q E+ +Y R A A
Sbjct: 564 DGVAFDAAIEQAHSSYMWVCSTNKIGAL--VQQRLIEHHRKNYPRLPATIRFDPDPSVAH 621
Query: 699 AFVDELVPVPVPQKRGAPVI 758
+ + PVPVP KRG V+
Sbjct: 622 CYRKQGRPVPVPGKRGEKVV 641
>SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21)
Length = 956
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 735 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 792
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRG V
Sbjct: 793 RYRKQGRPVPVPGKRGEKV 811
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 284 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCL 394
WQ + + GP KTSC +C KY++ N CL
Sbjct: 864 WQSNYTQCGPCASKTSCPVCNI--KYNL-NDLMIQCL 897
>SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + + M C+ N K + +Q E+ +Y R A A
Sbjct: 707 DGVAFDAAIEQAHPSDMWVCSTN--KMGALVQQQLVEHHRKNYPRLPAIIRFDPDPSVAH 764
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRGA V
Sbjct: 765 RYRKQGRPVPVPGKRGAKV 783
>SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 8.8
Identities = 27/102 (26%), Positives = 41/102 (40%)
Frame = +3
Query: 237 IERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIML 416
I + GI EEI +V A + + + G PKS +CT+VN+V G+ +
Sbjct: 72 IVKVGITTEEIDY----HVHKAIIEHGAYPSPLNYRGFPKS-VCTSVNEVAVHGIPNSRC 126
Query: 417 AAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVD 542
G + GG+ F + G G +LVD
Sbjct: 127 LQNGDLLSVDISLFYGGVHGDLCETFLV--GNVDESGRRLVD 166
>SB_27146| Best HMM Match : LIM (HMM E-Value=9.7)
Length = 296
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 102 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 159
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRG V
Sbjct: 160 RYRKQGRPVPVPGKRGEKV 178
>SB_21674| Best HMM Match : LIM (HMM E-Value=0.44)
Length = 885
Score = 28.3 bits (60), Expect = 8.8
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +3
Query: 540 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 698
DG+ FD + ++ M C+ N K + +Q E+ + Y R A A
Sbjct: 664 DGVAFDAAIEQAHRSDMWVCSTN--KMGALVQQRLVEHHMKKYPRLPATIRFDPDPSVAH 721
Query: 699 AFVDELVPVPVPQKRGAPV 755
+ + PVPVP KRG V
Sbjct: 722 RYRKQGRPVPVPGKRGEKV 740
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,014,522
Number of Sequences: 59808
Number of extensions: 518960
Number of successful extensions: 1543
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2538363813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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