Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_C22
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 250 1e-66
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 192 2e-49
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 131 7e-31
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 111 9e-25
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 69 4e-12
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 36 0.029
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 36 0.029
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 3.4
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.4
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical... 29 5.9
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 250 bits (611), Expect = 1e-66
Identities = 121/230 (52%), Positives = 155/230 (67%)
Frame = +3
Query: 111 STKVSLNEVVIASAVXTPMGSFRXXXXXXXXXXXXXXXXNAAIERAGIPKEEIKEVYIGN 290
S +S I A TP+GSFR AA+ER + I+EV++G
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 291 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGM 470
VC AN GQAPARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGM
Sbjct: 76 VCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGM 135
Query: 471 ESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDE 650
ESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDE
Sbjct: 136 ESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDE 195
Query: 651 YAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVXFEK 800
YA+NSYK+SA A+E E+VPV V K+G ++ +DEE+ +V F+K
Sbjct: 196 YAINSYKKSAKAWENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTKVNFDK 244
Score = 46.0 bits (104), Expect = 4e-05
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +2
Query: 782 KSXF*KVTKLSTVFQKENGTVTAGNASTLNDGAA 883
K F K T L TVFQK+ GT+TA NASTLNDGAA
Sbjct: 239 KVNFDKFTSLRTVFQKD-GTITAANASTLNDGAA 271
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 192 bits (469), Expect = 2e-49
Identities = 101/230 (43%), Positives = 141/230 (61%)
Frame = +3
Query: 120 VSLNEVVIASAVXTPMGSFRXXXXXXXXXXXXXXXXNAAIERAGIPKEEIKEVYIGNVCS 299
+S +V I S TP+G++R AAIER+G+ E+I+EV G V
Sbjct: 1 MSDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLP 60
Query: 300 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 479
A LGQ RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+M
Sbjct: 61 AGLGQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENM 120
Query: 480 SNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 659
S VPFY+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K ITR++QD YA+
Sbjct: 121 SQVPFYVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAI 180
Query: 660 NSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVXFEKLQN 809
SYK+++ A+ ++ F +E+VPV V R + V+ EDEEYK++ K+ +
Sbjct: 181 ESYKKASNAWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSS 229
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 797 KVTKLSTVFQKEN-GTVTAGNASTLNDGA 880
KV+ L VF ++ GT+T NAS+LNDGA
Sbjct: 226 KVSSLKPVFVRDGTGTITPANASSLNDGA 254
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 131 bits (316), Expect = 7e-31
Identities = 80/188 (42%), Positives = 106/188 (56%), Gaps = 2/188 (1%)
Frame = +3
Query: 24 EIVVTVSNRNIVLLDFNVLLQIFTAMAAFSTKVSLNEVVIASAVXTPMGSFRXXXXXXXX 203
EI+ ++ LD + + + T AA S K + I A TP+GSFR
Sbjct: 69 EIMSRYFKAKMLSLDGHAIGRGITTSAALSNK----DAFIVGAARTPIGSFRSSLSSVTA 124
Query: 204 XXXXXXXXNAAIERAGIPKEEIKE--VYIGNVCSANLGQAPARQAVIFAGLPKSTICTTV 377
AA+ER + I+E V++G VC AN GQA ARQA + AGL S TTV
Sbjct: 125 PELASVAIKAALERGAVKPSSIQEANVFLGQVCHANAGQASARQAALGAGLDLSVAVTTV 184
Query: 378 NKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFD 557
NK +SGMK+I+LAAQ +QTG QD+ + GGMESMS VPF+L R E S Q V+ V D
Sbjct: 185 NKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPFFLARVEQSSNKYQ-VEQTVQD 243
Query: 558 GLTDVYNK 581
G++D ++K
Sbjct: 244 GISDFFDK 251
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 111 bits (266), Expect = 9e-25
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Frame = +3
Query: 135 VVIASAVXTPMGSFRXXXXXXXXXXXXXXXXNAAIERAGIPKEEIKEVYIGNV-CSANLG 311
V I A T G+F AA++ A + + + V GNV S+ G
Sbjct: 6 VFIVGAKRTAFGTFGGKLKGLSATDLGVVASQAALKHANVGADAVDHVIFGNVVASSRDG 65
Query: 312 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 491
+R + +G+P++ TVN++C SG ++++ AAQ ++ G +I+LAGG E+MS VP
Sbjct: 66 IYLSRHIGLKSGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLGESNIVLAGGTENMSMVP 125
Query: 492 FYLK--RGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNS 665
F ++ R T+ G + +++D L+D Y K MG AE + ++TRQ+ DE+A+ S
Sbjct: 126 FAVRDIRFGTALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKLGAQYKVTRQEADEFALRS 185
Query: 666 YKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVXFEKL 803
A EA + +E+V + + ++G F DE + E L
Sbjct: 186 QTLWKKAQEAGVYKNEIVGITIKGRKGEE-SFEIDEHPRATTAESL 230
Score = 35.1 bits (77), Expect = 0.068
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 800 VTKLSTVFQKENGTVTAGNASTLNDGAAXL 889
+ KL VFQK+ G V AGNAS ++DGAA L
Sbjct: 230 LAKLKPVFQKD-GLVNAGNASGISDGAAAL 258
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 68.9 bits (161), Expect = 4e-12
Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 19/258 (7%)
Frame = +3
Query: 93 TAMAAFST-KVSLNEVVIASAVXTPMGSFRXXXXXXXXXXXXXXXXNAAIERAGIPKEEI 269
TA AA + K ++ +V+ AV TP A +E+ +P E++
Sbjct: 11 TARAASAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQL 70
Query: 270 KEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQD 449
+ G V AR+A + AG+P TV C S ++ L TG +
Sbjct: 71 DHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNAN 130
Query: 450 IILAGGMESMSNVPF-YLKRGETSYGGM--------------QLVDGIV---FDGLTDVY 575
I+AGG+E +S+VP Y + + GM Q+V ++ + +
Sbjct: 131 AIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFS 190
Query: 576 NKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPV 755
MG+ + A ++R++QDE+A+ S+ ++ A + F D +VPV + K+ P
Sbjct: 191 TGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--PK 247
Query: 756 IFAEDEEYKRVXFEKLQN 809
ED + EKL +
Sbjct: 248 TIKEDNGIRVSTLEKLSS 265
Score = 34.7 bits (76), Expect = 0.089
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 797 KVTKLSTVFQKENGTVTAGNASTLNDGAA 883
K++ L F K +GTVTA NAS L DGA+
Sbjct: 262 KLSSLKPAFVKPHGTVTAANASYLTDGAS 290
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 234 AIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIM 413
A++ + +I++ +G + A V G+P VN CASG +
Sbjct: 40 ALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSSGLF 95
Query: 414 LAAQGLQTGAQDIILAGGMESMS 482
L Q +++G D++L G E M+
Sbjct: 96 LGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 234 AIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIM 413
A++ + +I++ +G + A V G+P VN CASG +
Sbjct: 40 ALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSSGLF 95
Query: 414 LAAQGLQTGAQDIILAGGMESMS 482
L Q +++G D++L G E M+
Sbjct: 96 LGKQIIESGNSDVVLCAGFERMA 118
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +2
Query: 293 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 448
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 449 YN 454
YN
Sbjct: 242 YN 243
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 537 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 659
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 329 SCNICRFAKKYHMYNCKQSMCLWHEI 406
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
protein F25G6.2 protein.
Length = 1143
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Frame = +3
Query: 492 FYLKRGETSYGGMQLVDGIVF-----DGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYA 656
F+++R E +++V + + L+D + + +C + + + +D D++
Sbjct: 729 FFMERPELRSSCLEVVKELCYLPFIRSSLSD-QARMQIHDCLQESPPMYMRSSEDSDQWT 787
Query: 657 VNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVXFEKLQNCLR 818
YK S A Y D L+ +P+ A V +KRV L+ R
Sbjct: 788 DEMYKNSLAVYSTLMPSDPLLLIPL-----ASVYAQSTNVFKRVVLRSLEPVFR 836
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,841,859
Number of Sequences: 27780
Number of extensions: 393521
Number of successful extensions: 1208
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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