Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_C20
(783 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260822-1|AAG02020.1| 138|Tribolium castaneum alpha-esterase l... 25 0.52
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 24 1.6
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 6.4
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 6.4
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 6.4
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 21 8.4
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 21 8.4
>AF260822-1|AAG02020.1| 138|Tribolium castaneum alpha-esterase like
protein E3 protein.
Length = 138
Score = 25.4 bits (53), Expect = 0.52
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 326 KGTFPSTTSKNLCF*NYVFGIEFCGKLNCLILGF--GHIKFGYRNSMVP 186
+G +T N+C+ +F + G NCL+L +I G S+ P
Sbjct: 26 EGVLDATKPGNVCYQRDLFRQKITGSENCLVLNVYTRNIPDGIHTSLYP 74
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 23.8 bits (49), Expect = 1.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -2
Query: 425 LFCY*ELFKHLSCYITSNFRCVDHSNS 345
LF Y + ++CY+T + +DH+ S
Sbjct: 135 LFLYIFTYLSVTCYVTYAWSPIDHTES 161
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 585 ENPDAITYEPIDIVSGITDDQICRVIEK 668
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 585 ENPDAITYEPIDIVSGITDDQICRVIEK 668
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 585 ENPDAITYEPIDIVSGITDDQICRVIEK 668
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 585 ENPDAITYEPIDIVSGITDDQICRVIEK 668
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 585 ENPDAITYEPIDIVSGITDDQICRVIEK 668
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 373 TSGVLTIRTPPLSPFLKVPFPRP 305
T+G + + PP+ PF +P P
Sbjct: 153 TAGSMGLTRPPMYPFPAGQYPYP 175
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 373 TSGVLTIRTPPLSPFLKVPFPRP 305
T+G + + PP+ PF +P P
Sbjct: 45 TAGSMGLTRPPMYPFPAGQYPYP 67
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 79 NNIVSSKTQEKRG 41
NN+VSS QE RG
Sbjct: 91 NNVVSSTNQEIRG 103
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 693 EAHGMIKKMYDLFLKKDAL 749
+ G KK YD LKK+ L
Sbjct: 106 DPQGEYKKKYDELLKKEGL 124
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 693 EAHGMIKKMYDLFLKKDAL 749
+ G KK YD LKK+ L
Sbjct: 106 DPQGEYKKKYDELLKKEGL 124
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,060
Number of Sequences: 336
Number of extensions: 4290
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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