Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C18
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0687 - 5118774-5119412,5120359-5120424,5120636-5120690,512...    31   1.6  
05_02_0122 - 6840840-6841307                                           30   2.1  
01_06_1237 + 35630146-35630642,35632617-35632950,35633583-35633909     30   2.7  
09_06_0285 + 22030414-22030440,22031562-22031745,22031826-22032088     29   4.8  
07_01_0037 + 301864-302349                                             29   6.3  
01_01_0570 - 4231100-4232560                                           29   6.3  

>02_01_0687 -
           5118774-5119412,5120359-5120424,5120636-5120690,
           5120795-5121354
          Length = 439

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = +2

Query: 485 FATAQAGGHNAVSGLAGESSIAGASGVTFSGTKSIGISDQGVKLNEVHTDFNDALNEVKP 664
           F++++AGGH+A  G AG +S+ GA G   S   ++G        +    D+  +     P
Sbjct: 268 FSSSKAGGHDASRGAAGYNSLKGA-GYDPSKAPALGGQATAAAAHGSSADYYGSNQATPP 326

Query: 665 LSSIGAEAKA 694
             + G  A A
Sbjct: 327 SYAWGQAASA 336


>05_02_0122 - 6840840-6841307
          Length = 155

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = +2

Query: 446 AGRVASEDVAGNGFATAQAGGHNAVSGLAGESSIAGASG 562
           AGR A E   G G     AGG  AV    G   + GA G
Sbjct: 75  AGRGAGEGGGGGGAVEGGAGGGGAVGAGGGGGGVVGAGG 113


>01_06_1237 + 35630146-35630642,35632617-35632950,35633583-35633909
          Length = 385

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 648 SASLKSVCTSLSFTP*SDIPIDFVPENVTPEAPAI 544
           +A  + +  +L + P  D+P+   PE VTPE P++
Sbjct: 313 NAEEERISLALFYNPRGDVPVAPAPELVTPERPSL 347


>09_06_0285 + 22030414-22030440,22031562-22031745,22031826-22032088
          Length = 157

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 422 NVKAEAGLAGRVASEDVAGNGFATAQAGGHNAVSGLAGE 538
           N KAE G    V SE VAG G    Q G + A +   G+
Sbjct: 69  NQKAEGGAGEAVESEAVAGGGVVPEQEGENEAEADGGGQ 107


>07_01_0037 + 301864-302349
          Length = 161

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +2

Query: 431 AEAGLAGRVASEDVAGNGFATAQAGGHNAVSGLAGESSIAGASGVTFSGTKSIGI 595
           A+    G V S   AG G    +A G    +   G  +IAG  G    G   +G+
Sbjct: 21  ADGNAGGGVTSAGAAGGGGGGTRASGGGGEANAGGGCAIAGGGGCRGGGGCGMGM 75


>01_01_0570 - 4231100-4232560
          Length = 486

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = +2

Query: 431 AEAGLAGRVASEDVAGNGFATAQAGGHNAVSGLAGESSIAGASGVTFSGTKSIGIS 598
           A  G+ G +     AG G      GG     G  G   + G +G  F G K  G++
Sbjct: 260 AGGGMGGDIGGG--AGGGVGGGGGGGMGGGGGFGGGGGVGGNTGRDFDGGKGNGLN 313


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,090,240
Number of Sequences: 37544
Number of extensions: 286904
Number of successful extensions: 999
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)