Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C18
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.2  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.2  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   2.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   2.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   3.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   6.9  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   6.9  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   9.1  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    23   9.1  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 717 VSMLKCASALASAPMELKGLT 655
           +S++KCA  +  AP  +KGL+
Sbjct: 225 LSLVKCADTIIGAPGRIKGLS 245


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 717 VSMLKCASALASAPMELKGLT 655
           +S++KCA  +  AP  +KGL+
Sbjct: 225 LSLVKCADTIIGAPGRIKGLS 245


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 717 VSMLKCASALASAPMELKGLT 655
           +S++KCA  +  AP  +KGL+
Sbjct: 203 LSLVKCADTIIGAPGRIKGLS 223


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +2

Query: 431 AEAGLAGRVASE--DVAGNGFATAQAGGHNAVSGLAGESSI--AGASGVTFSGTKSIGI 595
           A A +A  VA+     +G G      GG +  SG  G SS+   G SG + SG   IG+
Sbjct: 636 AAAAVAAAVAASVSPGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGM 694


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +2

Query: 458  ASEDVAGNGFATAQAGGHNAVSGLAGESSIAGASGVTFSGTKSIGISDQGVKLNEVHTDF 637
            + +   G+G   +Q GG  ++SG  G      + G+  S   +IGI D  +   E     
Sbjct: 2040 SGDGATGSGDNGSQHGG-GSISGGGGTPGGGKSKGIIGSTQANIGIVDSNISPKESPDSI 2098

Query: 638  ND 643
             D
Sbjct: 2099 GD 2100


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 443  LAGRVASEDVAGNGFATAQAGGHNAVSGLAGESSIAGASGVTFSGTKS 586
            + G  A   +AG+    A A G  A  G+   +S+  A   T S TKS
Sbjct: 2731 IVGGFAPVGIAGSITFLAGAVGTTAAVGITAATSVGFAYVSTASATKS 2778


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 556 FWCNILRYEIDRYIGSRCK 612
           +WC++  +E+D  +G   K
Sbjct: 525 YWCSVAYFELDTQVGEMFK 543


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 553 SFWCNILRYEIDRYIG 600
           +FWC+I  YE++  +G
Sbjct: 311 TFWCSISYYELNLRVG 326


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 527 LAGESSIAGASGVTFSGTKSIGISDQGVKLNEVHTDFN 640
           LA  +    A    F G + +   D G+K++EV  DFN
Sbjct: 199 LADSAEFRNAMDCVFRGFRYM--DDSGLKVDEVVRDFN 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,364
Number of Sequences: 2352
Number of extensions: 12433
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)