Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C17
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         27   1.0  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    25   2.3  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   3.1  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   7.2  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 475  EDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIEK 585
            ED + +D +   VRD   + EE  LK E  ++  +EK
Sbjct: 1227 EDEVELDKEAPNVRDAAEVDEEDGLKMENGVIAEVEK 1263


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 757 ALYLVNLSEKDYIXKKNKWLPKLKEWIDKNXPGLSSDS 870
           ALY + +++ D   + N  +   K W+  N PG   D+
Sbjct: 86  ALYTLLMADPDAPSRSNPEMRSWKHWLVGNIPGADVDA 123


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 766 LVNLSEKDYIXKKNKWL 816
           L+N++EK+ I K N WL
Sbjct: 63  LINVNEKNQIMKSNVWL 79


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +1

Query: 649 KVKTILVDEKKHIXFGDWSAADIEVLNKYLFLTSKPALYLVNLSEK 786
           K+  ++VDEK  + F      + E L   ++  S PA+ +V+++++
Sbjct: 389 KLNKLVVDEKFALLFQSSFTLEQEELTVTVWTLSLPAVVIVHVNQE 434


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,876
Number of Sequences: 2352
Number of extensions: 14662
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)