Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_C17
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 350 7e-97
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 47 2e-05
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 41 0.001
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 36 0.030
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 31 0.84
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 31 0.84
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 31 1.1
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 31 1.1
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024818-1|AAK29945.2| 375|Caenorhabditis elegans Hypothetical ... 30 1.9
U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical p... 29 3.4
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 29 3.4
Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical p... 29 4.5
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 4.5
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF039042-6|AAC48244.1| 219|Caenorhabditis elegans Glutathione s... 29 5.9
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 29 5.9
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 29 5.9
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 350 bits (861), Expect = 7e-97
Identities = 162/242 (66%), Positives = 201/242 (83%)
Frame = +1
Query: 130 LIGRVGTNLKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYL 309
LIGR+GTNLKVGI+G+PNVGKSTFFNVLTKS+A AENFPFCTIDPNESRV V D+R+D+L
Sbjct: 14 LIGRLGTNLKVGILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNESRVAVQDDRFDWL 73
Query: 310 CEYHKPASKVPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIH 489
++KPASKVPAFLNV DIAGLV+GA+EGQGLGNAFLSH+ ACDA+F+LCRAFDD+DV H
Sbjct: 74 VNHYKPASKVPAFLNVTDIAGLVKGASEGQGLGNAFLSHVSACDALFHLCRAFDDDDVTH 133
Query: 490 VDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILV 669
V+G+V+PVRDLE I+ EL KD + + ++K++++ R +K K EYD+L +VK L
Sbjct: 134 VEGEVDPVRDLEIISNELFAKDLQFIDGPLDKVEKLFTRANDKTKKIEYDTLVRVKKCL- 192
Query: 670 DEKKHIXFGDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIXKKNKWLPKLKEWIDKNX 849
+EKK + W+ +IE+LNK+LFLT+KP +YLVNLSEKDYI KKNKWLPK+K WID N
Sbjct: 193 EEKKPVRQELWNEKEIEILNKHLFLTAKPIVYLVNLSEKDYIRKKNKWLPKIKAWIDTND 252
Query: 850 PG 855
G
Sbjct: 253 AG 254
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 48.0 bits (109), Expect = 9e-06
Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Frame = +1
Query: 160 VGIVGVPNVGKSTFFNVLTKSQAA-AENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 336
+G++G PN GKST L ++ ++ F T++P +V + ++ E
Sbjct: 164 IGLLGFPNAGKSTLLKALVPEKSVKIADYAFTTVNP---QVAFFKNKEEFSVE------- 213
Query: 337 VPAF-LNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNL--CRAFDDEDVIHVDGDVN 507
P+F L++ D+ G++ GA+ +G G FL H++ D + + C+ F ++ + N
Sbjct: 214 DPSFTLSIADLPGIIEGASMNRGKGYKFLKHLEYADIVVMVVDCQGFQLKNELDCPFR-N 272
Query: 508 PVRDLETIAEELRLKDEE 561
P+ + + E+ L +++
Sbjct: 273 PLESIALLNREVELYNQK 290
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/96 (28%), Positives = 50/96 (52%)
Frame = +1
Query: 163 GIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKVP 342
G+VG PN GKS+ +++++ ++PF T+ P+ V D ++ +
Sbjct: 192 GLVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPHIGVVFYED--FEQIA---------- 239
Query: 343 AFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIF 450
V DI GL+ + +GLG +FL HI+ C++++
Sbjct: 240 ----VADIPGLIEDSHLNKGLGISFLKHIERCESLW 271
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/103 (27%), Positives = 51/103 (49%)
Frame = +1
Query: 157 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 336
+V +VG P+VGKST + +T + + A + F T+ +P + Y+
Sbjct: 64 RVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTL------TCIPG-----VISYN----- 107
Query: 337 VPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRA 465
A + ++D+ G++ GA++G+G G +S K D I + A
Sbjct: 108 -GANIQLLDLPGIIEGASQGKGRGRQVISVAKTADLILMMLDA 149
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 36.3 bits (80), Expect = 0.030
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 142 VGTNLKVGIVGVPNVGKSTFFNVLTKSQAA-AENFPFCTIDPNE 270
+ T+++VG+VG PNVGKS+ N L + +A N P T + E
Sbjct: 256 IKTSIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGITKEIQE 299
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 31.5 bits (68), Expect = 0.84
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 166 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 255
+ G PNVGKS+F N +T++ + + F T
Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTT 203
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 31.5 bits (68), Expect = 0.84
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 166 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 255
+ G PNVGKS+F N +T++ + + F T
Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTT 203
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 154 LKVGIVGVPNVGKSTFFNVLTKSQ 225
+ VG +G PNVGKS+ N L K +
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKK 349
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 154 LKVGIVGVPNVGKSTFFNVLTKSQ 225
+ VG +G PNVGKS+ N L K +
Sbjct: 267 ISVGFIGYPNVGKSSLVNTLRKKK 290
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 154 LKVGIVGVPNVGKSTFFNVLTKSQ 225
+ VG +G PNVGKS+ N L K +
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKK 349
>AC024818-1|AAK29945.2| 375|Caenorhabditis elegans Hypothetical
protein Y54H5A.2 protein.
Length = 375
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Frame = +1
Query: 289 DERYDYLCEYHKPASKVPAFLNVVDIAGL-VRGAAEGQGLGNAFLSHIKACDAIFNLCRA 465
D +YLC P V L+ +IA L VR + ++ + K +A+F LC
Sbjct: 235 DTSDEYLCSILAPLMDVNDNLDEEEIAKLPVRLQYYEKERDSSDIVRQKLIEALFQLCAT 294
Query: 466 FDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIEK------LDRVVNRGGEKKLK 627
+V+ G +R+L+ E K ++ LL ++ + ++ E +
Sbjct: 295 KHGREVLRAKGVYPAMRELDKGTETAEDKHKKTLLSSQQEHTLHALIGILIRYESEMDVD 354
Query: 628 PEYDSLAKVKTILVDE 675
PE S+ ++ T V E
Sbjct: 355 PELSSIRELGTSEVTE 370
>U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical
protein T02G5.13b protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 136 GRVGTNLKVGIVGVPNVGKSTFFNVL--TKSQAAAENFPFCTIDPNES 273
GR +VGI G P VGKS+F L ++ + TIDP +
Sbjct: 18 GRDSMIFRVGISGSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSA 65
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 136 GRVGTNLKVGIVGVPNVGKSTFFNVL--TKSQAAAENFPFCTIDPNES 273
GR +VGI G P VGKS+F L ++ + TIDP +
Sbjct: 119 GRDSMIFRVGISGSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSA 166
>Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical
protein Y48E1B.7 protein.
Length = 751
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 544 RLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILVDEKK 681
RL ++++ I+ D + N KLK Y+ LAK++ L++ ++
Sbjct: 568 RLSSSNEVIKQIDYRDLIPNESTLLKLKKAYNYLAKIENELLNPRR 613
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +1
Query: 487 HVDGDVNPVRDLETIAEELRLKDE----EQLLQHIEKLDRVVNRGGEK-KLKPEYDS 642
HV+ D PV + E + EEL +++E EQ + E + V R G K KP++DS
Sbjct: 696 HVEEDYLPVEE-ELVEEELVVEEEALPVEQHQEEEEDGEPTVTRAGRVVKKKPQFDS 751
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 197 HSSMFLPRVKQQLKTFLSAPSTLMRVGYLYL---MKGMTTYANIINQQAKCQLSSTW 358
H +MF + ++ ++ P L V L L + GMT + + INQ+A +S W
Sbjct: 1102 HPAMFYDKDAEEHIEYVDEPDRLSAVKALLLTRDLNGMTPFQSAINQRAYGAATSIW 1158
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 197 HSSMFLPRVKQQLKTFLSAPSTLMRVGYLYL---MKGMTTYANIINQQAKCQLSSTW 358
H +MF + ++ ++ P L V L L + GMT + + INQ+A +S W
Sbjct: 1102 HPAMFYDKDAEEHIEYVDEPDRLSAVKALLLTRDLNGMTPFQSAINQRAYGAATSIW 1158
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 154 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFP 246
+++ +VG+ N GK+TF NV+ Q + P
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFTEDMIP 51
>AF039042-6|AAC48244.1| 219|Caenorhabditis elegans Glutathione
s-transferase protein21 protein.
Length = 219
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 733 YLFLTSKPALYLVNLSEKDYIXKKNKWLPKLKEWIDKNXPG-LSSDSILWS 882
Y L KP + + E+ YI +NK+ + +++N G L DS+ W+
Sbjct: 116 YATLQGKPEEEVQKIREEVYIPAQNKFYEIFSDILNRNKSGFLVGDSLTWA 166
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 142 VGTNLKVGIVGVPNVGKSTFFNVL 213
V T + +VG+PNVGKS+ N +
Sbjct: 112 VKTEYQAMVVGIPNVGKSSLINAI 135
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 154 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFP 246
+++ +VG+ N GK+TF NV+ Q + P
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFTEDMIP 51
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 142 VGTNLKVGIVGVPNVGKST-FFNVLTKSQ 225
+G K+ +VG+ N GK+T +N +TK Q
Sbjct: 14 IGKKYKIIVVGLDNAGKTTILYNYVTKDQ 42
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 658 TILVDEKKHIXFGDWSAADIEVLNKYLFLTSKPALYLVNLSEKDYIXKK 804
TIL+++ K+ F D+ A + N +L + K + +L L++ I K
Sbjct: 1005 TILLEKWKNYEFSDFFRAKCRIFNYFLLFSHKTSKFLEKLNQTMKIGAK 1053
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,068,769
Number of Sequences: 27780
Number of extensions: 350268
Number of successful extensions: 1411
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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