Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_C16
(790 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_8320| Best HMM Match : p450 (HMM E-Value=0) 70 2e-12
SB_25597| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19) 65 5e-11
SB_36654| Best HMM Match : p450 (HMM E-Value=1.3e-27) 64 1e-10
SB_12080| Best HMM Match : p450 (HMM E-Value=0) 58 1e-08
SB_5584| Best HMM Match : p450 (HMM E-Value=1) 54 1e-07
SB_25359| Best HMM Match : p450 (HMM E-Value=0) 54 2e-07
SB_24846| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_24479| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_15605| Best HMM Match : p450 (HMM E-Value=1.4013e-45) 44 1e-04
SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.086
SB_36341| Best HMM Match : DUF329 (HMM E-Value=1.7) 32 0.61
SB_41439| Best HMM Match : SWIM (HMM E-Value=0.088) 29 4.3
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 29 4.3
SB_35141| Best HMM Match : p450 (HMM E-Value=0) 28 7.5
SB_4770| Best HMM Match : Exo_endo_phos (HMM E-Value=0.031) 28 9.9
>SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 72.9 bits (171), Expect = 3e-13
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Frame = +1
Query: 268 FGPLVKVDGVFARGTMLFLFEPDHFEQVYRAEEANPLRPGFQVLDYYRTQLRKSRYGGLH 447
+G + K+D V ++ + +PD + R E P R +LD+YR +K +
Sbjct: 639 YGKIFKLD-VPGGFKIISVADPDTAMAILRNEPKYPKRFDSPLLDFYRNTRKK-----IP 692
Query: 448 GLINAQGPEWREFRTKVNPALLLPKLVKLYAPGIDEIAQDFVHRLSQIT----HDDAYIK 615
G+ A+GP+W ++R+ ++ +L PK V Y P D I F+ R+ I D Y
Sbjct: 693 GVFFAEGPDWHKYRSVISKRILRPKEVADYVPEFDNIGSKFLERVENIRGKAGTDSEYEV 752
Query: 616 DNFELELTKFSLEATALVALGSRLGCLKDSLDSD 717
+N + EL K+S E+ A + R G L+++++ D
Sbjct: 753 ENLDNELFKWSFESVAYMLFDKRFGTLEENVNPD 786
>SB_8320| Best HMM Match : p450 (HMM E-Value=0)
Length = 1207
Score = 69.7 bits (163), Expect = 2e-12
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Frame = +1
Query: 265 KFGPLVKVDGVFARGTMLFLFEPDHFEQVYRAEEANPLRPGFQVLDYYRTQLRKSRYGGL 444
K+G +++ + + G+++ + +PD + V R+E P R ++D YR QLR+
Sbjct: 767 KYGKILRQE-LPGVGSVVSISDPDDVQMVLRSESKFPKRSLLPLIDQYR-QLRQVP---- 820
Query: 445 HGLINAQGPEWREFRTKVNPALLLPKLVKLYAPGIDEIAQDF---VHRL-SQITHDDAYI 612
GL A G EW + RT ++ +L P V Y P D I +F +H+L Y
Sbjct: 821 PGLAFAVGEEWYKHRTVLSKKMLRPPEVAAYCPTFDAITNEFLIKIHKLRGPANSPKEYE 880
Query: 613 KDNFELELTKFSLEATALVALGSRLGCLKDSLDSDHPAHRLMKSTRDIFELTYKLEIXP 789
E EL ++S E + V R GCL D +D D A + + D F L + P
Sbjct: 881 VHGLENELFRWSFENISTVLFDKRFGCLDDHVDPD--AQAFIDAVGDFFSCISSLLLIP 937
>SB_25597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 68.1 bits (159), Expect = 8e-12
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Frame = +1
Query: 268 FGPLVKVDGVFARGTMLFLFEPDHFEQVYRAEEANPLRPGFQVLDYYRTQLRKSRYGGLH 447
+G + K D V ++ + +PD + R E P R ++D+YR +K +
Sbjct: 93 YGKIFKFD-VPGGFKIISVADPDTAMAILRNEPKYPKRFDIPLIDFYRETRKK-----IP 146
Query: 448 GLINAQGPEWREFRTKVNPALLLPKLVKLYAPGIDEIAQDFVHRLSQIT----HDDAYIK 615
G+ A+G +W ++R+ ++ +L PK V Y P D I F+ R+ I D Y
Sbjct: 147 GVFFAEGSDWHKYRSVISKRILRPKEVADYVPEFDNIGSKFLERVEYIRGKAGTDSEYEV 206
Query: 616 DNFELELTKFSLEATALVALGSRLGCLKDSLDSD 717
+N + EL K+S E+ A + R G L+++++ D
Sbjct: 207 ENLDNELFKWSFESVAYMLFDKRFGTLEENVNPD 240
>SB_23796| Best HMM Match : p450 (HMM E-Value=1.3e-19)
Length = 461
Score = 65.3 bits (152), Expect = 5e-11
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Frame = +1
Query: 235 MFDVLGILEGKFGPLVKVDGVFARGTMLFLFEPDHFEQVYRAEEANPLRPGFQVLDYYRT 414
MF V L ++GP+ K + +F R ++ L+ P E+V+RAE P RP + YR
Sbjct: 72 MFRVQKKLFDEYGPIYK-ENLFGRTSVNILY-PAESEKVFRAEGKYPSRPYVKAWKKYRE 129
Query: 415 QLRKSRYGGLH-GLINAQGPEWREFRTKVNPALLLPKLVKLYAPGIDEIAQDFVHRLSQI 591
G+H G+ +G EW+ R + P ++ P+ + E+ D + RL
Sbjct: 130 DR------GIHAGIAQTEGKEWKRVRQALAPKMMRPRELHDNIENFYEVVDDAMSRLQNA 183
Query: 592 THDDAYIK-DNFELELTKFSLEATALVALGSRLGCLKDSLDSDHPAHRLMKSTRDIFELT 768
+ DN E L ++ E+ +A +R+G +D D R ++ + FE+T
Sbjct: 184 RQGRTEGEVDNLEEHLFYWATESIGTMAFDTRIGLYEDPPKED--PKRFIECVHEFFEMT 241
Query: 769 YKLEI 783
LE+
Sbjct: 242 QNLEL 246
>SB_36654| Best HMM Match : p450 (HMM E-Value=1.3e-27)
Length = 377
Score = 64.1 bits (149), Expect = 1e-10
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = +1
Query: 349 VYRAEEANPLRPGFQVLDYYRTQLRKSRYGGLHGLINAQGPEWREFRTKVNPALLLPKLV 528
+ R E P R ++D+YR +K + G+ A+G +W ++R+ ++ +L PK V
Sbjct: 3 ILRNEPKYPKRFDIPLIDFYRETRKK-----IPGVFFAEGSDWHKYRSVISKRILRPKEV 57
Query: 529 KLYAPGIDEIAQDFVHRLSQIT----HDDAYIKDNFELELTKFSLEATALVALGSRLGCL 696
Y P D I F+ R+ I D Y +N + EL K+S E+ A + R G L
Sbjct: 58 ADYVPEFDNIGSKFLERVEYIRGKAGTDSEYEVENLDNELFKWSFESVAYMLFDKRFGTL 117
Query: 697 KDSLDSD 717
+++++ D
Sbjct: 118 EENVNPD 124
>SB_12080| Best HMM Match : p450 (HMM E-Value=0)
Length = 522
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Frame = +1
Query: 319 FLFEPDHFEQVYRAEEANPLR-PGFQVLDYYRTQLRKSRYGGLHGLINAQGPEWREFRTK 495
F+ +P +V++ E P R P ++ Y+ + +++ HG+ + G EW + R+
Sbjct: 104 FVADPKLVREVFQNEGKYPQREPQIELWMDYKEKRKQA-----HGVFSLNGEEWLKARSV 158
Query: 496 VNPALLLPKLVKLYAPGIDEIAQDFVHRLSQI--THDDAYIKDNFELELTKFSLEATALV 669
+N +L PK+V YAP + + DF+ R++++ T D + N + L K+S+E+ V
Sbjct: 159 LNKKMLKPKVVHGYAPELSNVVDDFIGRVNELRSTTSDKTV-PNLQNVLFKWSMESIGTV 217
Query: 670 ALGSRLGCLKDSLDSDHPAHRLMKSTRDIFELTYKLEIXP 789
+ G S + ++ + +++F + K+ P
Sbjct: 218 LYEKQFGAFSKS--GSEESQSIITAIQNLFSVFIKMVFMP 255
>SB_5584| Best HMM Match : p450 (HMM E-Value=1)
Length = 286
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Frame = +1
Query: 319 FLFEPDHFEQVYRAEEANPLR-PGFQVLDYYRTQLRKSRYGGLHGLINAQGPEWREFRTK 495
F+ +P +V+R E P R P ++ Y+ + +++ HG+ ++ G EW + R+
Sbjct: 71 FVADPKLVREVFRNEGKYPQREPQIELWMDYKEKRKQA-----HGVFSSLGEEWFKARSV 125
Query: 496 VNPALLLPKLVKLYAPGIDEIAQDFVHRLSQI--THDDAYIKDNFELELTKFSLE 654
+N +L PK+V YAP + + DF+ R++++ T D + N + EL K+S E
Sbjct: 126 LNKKMLKPKVVDGYAPELSNVVDDFIGRVNELRSTTSDKTV-PNLQNELFKWSTE 179
>SB_25359| Best HMM Match : p450 (HMM E-Value=0)
Length = 1084
Score = 53.6 bits (123), Expect = 2e-07
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Frame = +1
Query: 265 KFGPLVKVDGVFARGTMLFLFEPDHFEQVYRAEEANPLRPGFQVLDYYRTQLRKSRYGGL 444
++G L K + A+ T++++ + + E++ R E P R V+ +Y + + +
Sbjct: 639 RYGKLYKRE---AQSTIVYVADVNDAEKILRYEAKYPHRIEDPVISHYMAKRQ-----AI 690
Query: 445 HGLINAQGPEWREFRTKVNPALLLPKLVKLYAPGIDEIAQDFVHRLSQI--THDDAYIKD 618
G+ + G W + R ++ LL+P++V+ Y P + I DF+ RLS I +Y +
Sbjct: 691 PGVFFSNGNLWYKHRRAISKKLLVPRMVEQYVPTYNAIVDDFLARLSFIKGPEGSSYENE 750
Query: 619 --NFELELTKFSLEATALVALGSRLGCLKDSLDSDHPAHRLMKSTRDIF 759
N + EL +F+ E+ + R G L D + P L + D F
Sbjct: 751 VSNLQDELFRFAFESVGFLLFDKRFG-LVDGGEDMRPEVALFAKSLDGF 798
>SB_24846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 52.8 bits (121), Expect = 3e-07
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Frame = +1
Query: 265 KFGPLVKVDGVFARGTMLFLFEPDHFEQVYRAEEANPLRP-GFQVLDYYRTQLRKSRYGG 441
++GP+ K D + T + + +P+ +V R E P RP F + +R + + +
Sbjct: 96 RYGPIYK-DHLMGT-TTVNISDPEEITKVIRNEGKYPERPFHFDAIIKHREKTTQPQ--- 150
Query: 442 LHGLINAQGPEWREFRTKVNPALLLPKLVKLYAPGIDEIAQDFVHRLSQITHDDAYIKDN 621
G++ A+G EW RT +L PK + + G ++A D + + D +
Sbjct: 151 --GVVYAEGQEWLRLRTAFGKKMLRPKELAKHVVGFSDVANDAMQSIKG-ARDGKMEVEE 207
Query: 622 FELELTKFSLEATALVALGSRLG 690
EL+L K+++E+ + G R+G
Sbjct: 208 LELQLQKYTIESIGTLVYGFRVG 230
>SB_24479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 758
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/142 (25%), Positives = 63/142 (44%)
Frame = +1
Query: 265 KFGPLVKVDGVFARGTMLFLFEPDHFEQVYRAEEANPLRPGFQVLDYYRTQLRKSRYGGL 444
K+GP+ K D + T + + +P+ +V+R E P R D Q + +
Sbjct: 43 KYGPIYK-DHLMGT-TTVSISDPEDIAKVFRNEGKYPERTA----DLGALQKHREKTNQP 96
Query: 445 HGLINAQGPEWREFRTKVNPALLLPKLVKLYAPGIDEIAQDFVHRLSQITHDDAYIKDNF 624
G+ A+G EW RT +L PK + + G +A D + + D +
Sbjct: 97 PGVAYAEGQEWLRLRTAFGKKMLRPKELAKHVVGFSGVANDAMQSIKG-ARDGKMEVEEL 155
Query: 625 ELELTKFSLEATALVALGSRLG 690
EL+L K+++E+ + G R+G
Sbjct: 156 ELQLQKYTIESIGTLVYGFRVG 177
>SB_15605| Best HMM Match : p450 (HMM E-Value=1.4013e-45)
Length = 454
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 460 AQGPEWREFRTKVNPALLLPKLVKLYAPGIDEIAQDFVHRLSQIT----HDDAYIKDNFE 627
A GP+W ++R + + P+ + Y P ++I+ + + RL+ + + Y N E
Sbjct: 71 ANGPDWDKYRESIKSQVTRPRELAEYIPTFNQISDELLERLNSLRTPKGRNYEYEVVNLE 130
Query: 628 LELTKFSLEATALVALGSRLGCLKDSLDSDHPAHRLMKSTRDIFELTYKLEIXP 789
EL K+S E R G ++ +D A + S R +E L + P
Sbjct: 131 EELIKWSFETATYAMFNQRFGYMEKRGHTD--AQVFISSLRGFWEALMPLTLLP 182
>SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 34.7 bits (76), Expect = 0.086
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Frame = +1
Query: 265 KFGPLVKVDGVFARGTMLFLFEPDHFEQVYRAEEANPLRPGFQVLDYYRTQLRKSRYGGL 444
K+GP++ V F ++F+ P+ ++V + ++ L + Q R
Sbjct: 75 KYGPII-VFWAF-HNPVVFVVSPEMVKKVLVTYDLPKSTRVYEKLQFVYNQRCTGR---- 128
Query: 445 HGLINAQGPE-WREFRTKVNPALLLPKLVKLYAPGIDEIAQDFVHRLSQITHDDAYIKDN 621
G++ P W + RT +NPA L+ L +P + I + + +LS I+ D + +
Sbjct: 129 -GILTEPDPSAWHKKRTLLNPAFHRKNLMNLMSP-FNVICERMIDKLSLIS--DGKTQVD 184
Query: 622 FELELTKFSLEATALVALGSRLGCLKD 702
EL++ +L+ VA L +KD
Sbjct: 185 LADELSRTTLDVIGKVAFDIDLDAIKD 211
>SB_36341| Best HMM Match : DUF329 (HMM E-Value=1.7)
Length = 197
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 337 HFEQVYRAEEANPLRPGFQVLDY-YRTQLRKSRYGGLHGLINAQGPEWREFR 489
+F+ R+ N +RP F V DY YR + KSR G IN WRE R
Sbjct: 52 YFDMCTRSYHENVVRPVFGVSDYWYRYEFAKSR-----GQINRHQLSWREDR 98
>SB_41439| Best HMM Match : SWIM (HMM E-Value=0.088)
Length = 921
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 352 YRAEEAN-PLRPGFQVLDYYRTQLRKSRYGGLHGLINAQGPEWREFRTKVNP 504
Y ++AN L P + Y TQ+ K RYGG L+ ++ E E K NP
Sbjct: 299 YHRKKANRSLMPRRRDFSYLYTQMCKERYGGTGHLMFSKMVEKLEEYRKANP 350
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 385 GFQVLDYYRTQLRKSRYGGLHGLINAQGPEWREFRTKVNPALLLP 519
G Q LD Y+ + +GG+ + N Q +WR +K+ A++ P
Sbjct: 184 GNQDLDLYKLYVLVQEFGGMEEVTNQQ--QWRNLYSKMGIAIMPP 226
>SB_35141| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +1
Query: 421 RKSRYGGLHGLINAQGPEWREFRTKVNPALLLPKLVKLYAPGIDEIAQDFVHRLSQI 591
R +R LHG+ +A +W+ R+ + P KL ++ P I E + ++ ++
Sbjct: 117 RDTRSEMLHGMFSATDDKWKRIRSTLTPTFTSGKLRQM-NPKIRESCDTLMDKIGKV 172
>SB_4770| Best HMM Match : Exo_endo_phos (HMM E-Value=0.031)
Length = 599
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -3
Query: 263 PSKIPSTSNILVFGPIVPNNFTNNNQNMHYYYYIMQAL 150
P+++PS+ + ++FG I N+N N Y +I + +
Sbjct: 88 PTRLPSSVSCVLFGTIYHPPDANSNDNEALYQHIQETI 125
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,206,374
Number of Sequences: 59808
Number of extensions: 518715
Number of successful extensions: 1807
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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