Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C13
         (895 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-391|AAF59267.1|  176|Drosophila melanogaster CG1707-PA ...   251   8e-67
AY113596-1|AAM29601.1|   99|Drosophila melanogaster RH47207p pro...    35   0.17 
AY094955-1|AAM11308.1| 1747|Drosophila melanogaster SD01201p pro...    29   8.6  
AE014296-3168|AAF49146.2| 1747|Drosophila melanogaster CG32210-P...    29   8.6  

>AE013599-391|AAF59267.1|  176|Drosophila melanogaster CG1707-PA
           protein.
          Length = 176

 Score =  251 bits (615), Expect = 8e-67
 Identities = 108/159 (67%), Positives = 133/159 (83%), Gaps = 1/159 (0%)
 Frame = +1

Query: 295 KDTKEIEDFMFQQTMYRIKDPRKTIPFYTGVLGMTLLKQLHFPAMKFSLFFMGYENPAEV 474
           K     +DF+FQQTMYRIKDPRK++PFYTGVLGMTLL +L FP  KFSL+F+GYEN  +V
Sbjct: 18  KPDSSTKDFLFQQTMYRIKDPRKSLPFYTGVLGMTLLVKLDFPEAKFSLYFLGYENATDV 77

Query: 475 PRDDDARTKWAMTRKATLELTYNWGTESD-DSSYHNGNSDPRGFGHIGILVPDVDVACAR 651
           P+D   R  WA++RKAT+ELT+NWGTE D D +YH GN+DPRGFGHIGI+VPDV  AC R
Sbjct: 78  PKDPKQRRSWALSRKATIELTHNWGTERDPDQNYHTGNTDPRGFGHIGIMVPDVYAACQR 137

Query: 652 FEQLGVKFIKRPNDGKMKGLAFIQDPDGYWIEIFTSNVV 768
           F++LGV F+K+P+DG+MKGLAFI+DPDGYWIEIF ++ V
Sbjct: 138 FQELGVDFVKKPDDGRMKGLAFIKDPDGYWIEIFNAHSV 176


>AY113596-1|AAM29601.1|   99|Drosophila melanogaster RH47207p
           protein.
          Length = 99

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 309 NRGFYVPTNNVQDQRSKEDYTFLHWCPRNDIT*ATAFSSNEVFVVLYGL 455
           ++G  +P N+V  Q S +   FLH  PR+D+   T     +V  VL G+
Sbjct: 44  HQGLPLPANHVPHQGSTQVAAFLHGRPRDDLAGETGLPRGQVLAVLSGV 92


>AY094955-1|AAM11308.1| 1747|Drosophila melanogaster SD01201p
           protein.
          Length = 1747

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 604 GHIGILVPDVDVACARFEQLGVKFIKRPND 693
           GH+ +LV D+ +A    E   VKF++ PN+
Sbjct: 532 GHVLLLVQDLHMANPSLESPSVKFVEGPNE 561


>AE014296-3168|AAF49146.2| 1747|Drosophila melanogaster CG32210-PA
           protein.
          Length = 1747

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 604 GHIGILVPDVDVACARFEQLGVKFIKRPND 693
           GH+ +LV D+ +A    E   VKF++ PN+
Sbjct: 532 GHVLLLVQDLHMANPSLESPSVKFVEGPNE 561


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,650,034
Number of Sequences: 53049
Number of extensions: 925369
Number of successful extensions: 2323
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2322
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)