Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C09
         (775 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         24   4.5  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   6.0  

>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 339 TDDISSWDADFLK 377
           TDD+ SW A FL+
Sbjct: 46  TDDVDSWKASFLR 58


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
 Frame = -3

Query: 722 FYIIYNTNKFTWFKLIILYCHGKNSLMLH--------T***YIKMLANSIYYGLLFFTPF 567
           F I+YN  +F W   +I   H    L ++        T   YIK+  + +Y   ++F PF
Sbjct: 217 FSILYNLPRF-WEVTLISSTHPDTGLTIYCVKASDMRTNETYIKVYIHWLYMIFVYFLPF 275

Query: 566 --ILFTNLIFF 540
             I F NL+ +
Sbjct: 276 SLISFFNLMIY 286


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,298
Number of Sequences: 2352
Number of extensions: 14110
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)