Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C08
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      23   1.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.0  

>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 57  LVQRSVWNHFNKVSRNIST 113
           +V R VW  FN+ ++N+ T
Sbjct: 29  VVVRGVWVSFNQTAQNVDT 47


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 135 ATTACETKTEDKNWVSYGFDY 197
           A  A E  T +K+W++   DY
Sbjct: 251 AAVASEKVTSEKSWIALNDDY 271


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -3

Query: 168 YLLFWSHKQLWRCRCSF*KWK 106
           Y +  SH   W   C F +W+
Sbjct: 495 YRVIISHVDAWYLDCGFGRWR 515


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 288  YSPDVHMRDW 317
            Y+P+ HM DW
Sbjct: 1240 YNPEEHMCDW 1249


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 360 AGLPPISPNF 389
           A LPP+ PNF
Sbjct: 691 ADLPPVPPNF 700


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 215 H*CPSRHLFLFCNIMYCF 268
           H C    +FL CN++  F
Sbjct: 115 HICELHTIFLVCNVLTVF 132


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 335 KCFTLSPVPHVY 300
           K  +LSP PHVY
Sbjct: 274 KSASLSPPPHVY 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,600
Number of Sequences: 336
Number of extensions: 3699
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)