Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_C07
(876 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55495| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 1e-14
SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0) 31 1.2
SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0) 31 1.2
SB_33129| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 29 3.7
SB_38421| Best HMM Match : Pox_A32 (HMM E-Value=0.022) 29 4.9
SB_1872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_21430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18) 28 8.6
>SB_55495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 858
Score = 77.8 bits (183), Expect = 1e-14
Identities = 49/166 (29%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Frame = +2
Query: 122 QALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIMV 301
+A E+R + K GA++ EE S ++D+L +I+ C CFKE ++++E+++NSI+S+++
Sbjct: 49 KAQEIRTFLKEQGADLKEE-SITPLQDELAEILECCQVCFKE--DAELESVMNSILSLVL 105
Query: 302 SIPLERGENLILAFSQRLTKAPGPKLGMVA---LQSLWRLYNNLEPNSPLRYHVYYHVIE 472
+P +R E LI +L A L+ L L++ L P+R+ VY +
Sbjct: 106 VVPEKRNE-LIKKCCDKLKANMSEDENSSAAARLRVLSVLFSGLPEKDPMRHEVYCTQLT 164
Query: 473 LAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQ 610
+AA+ V ++ T +E ++ +Q ++++RLLH L D+
Sbjct: 165 IAAKASLVDDIPTELELVKGWLGLWDVDADQRRQVFRLLHGALHDE 210
>SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0)
Length = 965
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 503 VFTGV-EQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASY 679
++TGV QL L RL HQ D++S+L+ V + L G +TD S
Sbjct: 814 LYTGVARQLPSNVHMLTLETSNQYALIRLEHQFEADEDSKLSMPVNVSLQGLFTDLEVSK 873
Query: 680 ARE 688
E
Sbjct: 874 VEE 876
>SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0)
Length = 887
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 503 VFTGV-EQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASY 679
++TGV QL L RL HQ D++S+L+ V + L G +TD S
Sbjct: 802 LYTGVARQLPSNVHMLTLETSNQYALIRLEHQFEADEDSKLSMPVNVSLQGLFTDLEVSK 861
Query: 680 ARE 688
E
Sbjct: 862 VEE 864
>SB_33129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 310 WYRNHNRDNTVQNGFDVRFTRLFETSITNPNDLMQII-LNAL 188
WY R N V+NGFD+ + ++T+P ++ LN++
Sbjct: 72 WY-GRRRQNCVRNGFDITVLTRYSEAVTHPRTYRALLSLNSV 112
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +2
Query: 518 EQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAI 697
+Q ++ A+ +++ + L + L +EL KV ELL D+ + ++ +AI
Sbjct: 1285 KQFQQHVASLKSESQRSKTLLENVRNELTKTKAELT-KVQAELLNVKNDQQKAQSQMEAI 1343
Query: 698 KCIATALADPNTFLLDPL 751
K +T++ N +D L
Sbjct: 1344 KSQSTSVEGKNQAEVDAL 1361
>SB_38421| Best HMM Match : Pox_A32 (HMM E-Value=0.022)
Length = 1144
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/87 (22%), Positives = 33/87 (37%)
Frame = +2
Query: 497 REVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENAS 676
+E F V+ + A+ P E ++ +H + + NS +A +I + G
Sbjct: 861 KETFRVVQHVGSPAASEPQGREGLRARAEGIHTPVPESNSAWSASSVIGVAGLLVSSIGL 920
Query: 677 YAREDAIKCIATALADPNTFLLDPLLT 757
Y R + T N DPL T
Sbjct: 921 YTRRRELAAAFTRTPAVNQRATDPLAT 947
>SB_1872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1801
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +2
Query: 503 VFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTY-TDENAS 676
V + V + K +C P+++ ++KL++L+ + K+ E++ K + L G Y T +NA+
Sbjct: 618 VASAVLDIGKTLLDCVPTSDLVEKLFQLVSKTGKEW-KEVSKKAVSILCGPYLTADNAT 675
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +2
Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
D ELR SLGA + +E L ++ G+C+ E + E + N V +M
Sbjct: 2974 DMITELRNAEISLGASLMGTPDLDQLESQLEEVKGLCED--MEGKQELFENLKNKGVDMM 3031
Query: 299 VSIPLE 316
IP E
Sbjct: 3032 EKIPEE 3037
>SB_21430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 533 EFANCPPSNEQMQKLYRLLHQVLKDQNSELAAK---VMIELLGTYTDENASYAREDAIK 700
EF P E + RLL Q+ DQ+SELA + + LG Y D N R + +K
Sbjct: 294 EFKLKSPDVEDRLAVTRLLSQMFSDQSSELAIQNKSLWQSYLGRYLDINVD-VRVECVK 351
>SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18)
Length = 1719
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 239 FKEPSESDIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYN 418
FKE ++ I ++ IV + V + E+G L + + + S RL+
Sbjct: 1307 FKESGKASIPSVNREIVRVWVDLCSEKGVPLEREAEEMIRLLDESLKHRSRIDSTMRLWM 1366
Query: 419 NLEPNSPLRYHV 454
+ P+ P+ HV
Sbjct: 1367 KIAPHVPVEIHV 1378
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,590,389
Number of Sequences: 59808
Number of extensions: 436901
Number of successful extensions: 1164
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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