BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_C07
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein. 201 3e-51
BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation ... 201 3e-51
BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1... 201 3e-51
AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5 p... 201 3e-51
AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein ... 201 3e-51
AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein. 199 1e-50
DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein ... 99 2e-20
AF277183-1|AAK07542.1| 206|Homo sapiens PNAS-125 protein. 81 4e-15
AL136233-1|CAI17232.1| 196|Homo sapiens RUN and FYVE domain con... 32 2.4
AF461266-1|AAL67520.1| 606|Homo sapiens RUFY2 protein. 32 2.4
AF411980-1|AAL04164.1| 590|Homo sapiens Run- and FYVE-domain co... 32 2.4
AB040970-1|BAA96061.1| 619|Homo sapiens KIAA1537 protein protein. 32 2.4
AL133230-3|CAI21688.2| 946|Homo sapiens chromosome 20 open read... 31 4.1
AK056792-1|BAB71286.1| 593|Homo sapiens protein ( Homo sapiens ... 31 4.1
BC011720-1|AAH11720.1| 582|Homo sapiens GNL3L protein protein. 30 9.6
BC003603-1|AAH03603.1| 575|Homo sapiens Unknown (protein for IM... 30 9.6
AL391139-1|CAI40396.1| 582|Homo sapiens guanine nucleotide bind... 30 9.6
AK001475-1|BAA91712.1| 582|Homo sapiens protein ( Homo sapiens ... 30 9.6
>CR450300-1|CAG29296.1| 374|Homo sapiens GA17 protein.
Length = 374
Score = 201 bits (490), Expect = 3e-51
Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Frame = +2
Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
DQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE + D+E+++NS+VS++
Sbjct: 13 DQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVMNSVVSLL 71
Query: 299 VSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 478
+ + ++ E LI + ++L K + + LQ L L++ ++ N+P+RY VY +I++A
Sbjct: 72 LILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVA 131
Query: 479 ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGT 655
A G ++ + T ++Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+
Sbjct: 132 ASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGS 191
Query: 656 YTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFXEGELXH 796
YT++NAS AR DA +CI AL DPN FL D LLTLKPV+F EGEL H
Sbjct: 192 YTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIH 238
>BC051292-1|AAH51292.1| 374|Homo sapiens eukaryotic translation
initiation factor 3, subunit M protein.
Length = 374
Score = 201 bits (490), Expect = 3e-51
Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Frame = +2
Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
DQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE + D+E+++NS+VS++
Sbjct: 13 DQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVMNSVVSLL 71
Query: 299 VSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 478
+ + ++ E LI + ++L K + + LQ L L++ ++ N+P+RY VY +I++A
Sbjct: 72 LILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVA 131
Query: 479 ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGT 655
A G ++ + T ++Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+
Sbjct: 132 ASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGS 191
Query: 656 YTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFXEGELXH 796
YT++NAS AR DA +CI AL DPN FL D LLTLKPV+F EGEL H
Sbjct: 192 YTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIH 238
>BC019103-1|AAH19103.1| 374|Homo sapiens PCI domain containing 1
(herpesvirus entry mediator) protein.
Length = 374
Score = 201 bits (490), Expect = 3e-51
Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Frame = +2
Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
DQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE + D+E+++NS+VS++
Sbjct: 13 DQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVMNSVVSLL 71
Query: 299 VSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 478
+ + ++ E LI + ++L K + + LQ L L++ ++ N+P+RY VY +I++A
Sbjct: 72 LILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVA 131
Query: 479 ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGT 655
A G ++ + T ++Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+
Sbjct: 132 ASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGS 191
Query: 656 YTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFXEGELXH 796
YT++NAS AR DA +CI AL DPN FL D LLTLKPV+F EGEL H
Sbjct: 192 YTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIH 238
>AY769947-1|AAX12524.1| 374|Homo sapiens fetal lung protein B5
protein.
Length = 374
Score = 201 bits (490), Expect = 3e-51
Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Frame = +2
Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
DQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE + D+E+++NS+VS++
Sbjct: 13 DQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVMNSVVSLL 71
Query: 299 VSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 478
+ + ++ E LI + ++L K + + LQ L L++ ++ N+P+RY VY +I++A
Sbjct: 72 LILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVA 131
Query: 479 ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGT 655
A G ++ + T ++Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+
Sbjct: 132 ASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGS 191
Query: 656 YTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFXEGELXH 796
YT++NAS AR DA +CI AL DPN FL D LLTLKPV+F EGEL H
Sbjct: 192 YTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIH 238
>AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein
variant protein.
Length = 374
Score = 201 bits (490), Expect = 3e-51
Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Frame = +2
Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
DQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE + D+E+++NS+VS++
Sbjct: 13 DQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVMNSVVSLL 71
Query: 299 VSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 478
+ + ++ E LI + ++L K + + LQ L L++ ++ N+P+RY VY +I++A
Sbjct: 72 LILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVA 131
Query: 479 ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGT 655
A G ++ + T ++Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+
Sbjct: 132 ASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGS 191
Query: 656 YTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFXEGELXH 796
YT++NAS AR DA +CI AL DPN FL D LLTLKPV+F EGEL H
Sbjct: 192 YTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIH 238
>AF064603-1|AAC17108.1| 374|Homo sapiens GA17 protein protein.
Length = 374
Score = 199 bits (485), Expect = 1e-50
Identities = 102/227 (44%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Frame = +2
Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
DQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE + D+E+++NS+VS++
Sbjct: 13 DQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVVNSVVSLL 71
Query: 299 VSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 478
+ + ++ E LI + ++L K + + LQ L L++ ++ N+P+RY VY +IE+
Sbjct: 72 LILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIEVV 131
Query: 479 ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNSELAAKVMIELLGT 655
A G ++ + T ++Q+RK ++ + E+ L RLL++ L D + S+ A+KVM+ELLG+
Sbjct: 132 ASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALADCKKSDAASKVMVELLGS 191
Query: 656 YTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFXEGELXH 796
YT++NAS AR DA +CI L DPN FL D LLTLKPV+F EGEL H
Sbjct: 192 YTEDNASQARVDAHRCIVEPLKDPNAFLFDHLLTLKPVKFLEGELIH 238
>DQ185042-1|ABD14422.1| 136|Homo sapiens dendritic cell protein
GA17 protein.
Length = 136
Score = 99.1 bits (236), Expect = 2e-20
Identities = 50/127 (39%), Positives = 81/127 (63%)
Frame = +2
Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
DQA ELR Y KS GAEISEE S G+ DL +I+ CD C KE + D+E+++NS+VS++
Sbjct: 10 DQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVMNSVVSLL 68
Query: 299 VSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 478
+ + ++ E LI + ++L K + + LQ L L++ ++ N+P+R VY +I++A
Sbjct: 69 LILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRCTVYCSLIKVA 128
Query: 479 ARVGFVR 499
A G ++
Sbjct: 129 ASCGAIQ 135
>AF277183-1|AAK07542.1| 206|Homo sapiens PNAS-125 protein.
Length = 206
Score = 81.4 bits (192), Expect = 4e-15
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +2
Query: 635 MIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFXEGELXH 796
M+ELLG+YT++NAS AR DA +CI AL DPN FL D LLTLKPV+F EGEL H
Sbjct: 1 MVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIH 54
>AL136233-1|CAI17232.1| 196|Homo sapiens RUN and FYVE domain
containing 2 protein.
Length = 196
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 524 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 643
L+KEF N N+Q++K+Y Q L++ ++L+ +K+ IE
Sbjct: 73 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 113
>AF461266-1|AAL67520.1| 606|Homo sapiens RUFY2 protein.
Length = 606
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 524 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 643
L+KEF N N+Q++K+Y Q L++ ++L+ +K+ IE
Sbjct: 483 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 523
>AF411980-1|AAL04164.1| 590|Homo sapiens Run- and FYVE-domain
containing protein Rabip4R protein.
Length = 590
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 524 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 643
L+KEF N N+Q++K+Y Q L++ ++L+ +K+ IE
Sbjct: 467 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 507
>AB040970-1|BAA96061.1| 619|Homo sapiens KIAA1537 protein protein.
Length = 619
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 524 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 643
L+KEF N N+Q++K+Y Q L++ ++L+ +K+ IE
Sbjct: 496 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 536
>AL133230-3|CAI21688.2| 946|Homo sapiens chromosome 20 open reading
frame 175 protein.
Length = 946
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +2
Query: 512 GVEQLRKEFANCPPS---NEQMQKLYRLLHQVLKD 607
G +++ FA CPPS E +Q+L R LH+ +D
Sbjct: 155 GASSMQRAFARCPPSRAARESLQELGRSLHECAED 189
>AK056792-1|BAB71286.1| 593|Homo sapiens protein ( Homo sapiens
cDNA FLJ32230 fis, clone PLACE6004464, weakly similar to
Human placenta (Diff48) mRNA. ).
Length = 593
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +2
Query: 512 GVEQLRKEFANCPPS---NEQMQKLYRLLHQVLKD 607
G +++ FA CPPS E +Q+L R LH+ +D
Sbjct: 155 GASSMQRAFARCPPSRAARESLQELGRSLHECAED 189
>BC011720-1|AAH11720.1| 582|Homo sapiens GNL3L protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 9.6
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 614 SELAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPL 751
+ L+A+++ E+ + E+ A ED ++C+AT +D DPL
Sbjct: 411 THLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELLGDTDPL 456
>BC003603-1|AAH03603.1| 575|Homo sapiens Unknown (protein for
IMAGE:3543897) protein.
Length = 575
Score = 30.3 bits (65), Expect = 9.6
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 614 SELAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPL 751
+ L+A+++ E+ + E+ A ED ++C+AT +D DPL
Sbjct: 411 THLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELLGDTDPL 456
>AL391139-1|CAI40396.1| 582|Homo sapiens guanine nucleotide binding
protein-like 3 (nucleolar)-like protein.
Length = 582
Score = 30.3 bits (65), Expect = 9.6
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 614 SELAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPL 751
+ L+A+++ E+ + E+ A ED ++C+AT +D DPL
Sbjct: 411 THLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELLGDTDPL 456
>AK001475-1|BAA91712.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ10613 fis, clone NT2RP2005393, weakly similar to
AUTOANTIGEN NGP-1. ).
Length = 582
Score = 30.3 bits (65), Expect = 9.6
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 614 SELAAKVMIELLGTYTDENASYAREDAIKCIATALADPNTFLLDPL 751
+ L+A+++ E+ + E+ A ED ++C+AT +D DPL
Sbjct: 411 THLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELLGDTDPL 456
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,753,927
Number of Sequences: 237096
Number of extensions: 2073025
Number of successful extensions: 4531
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4518
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -