Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C07
         (876 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118924-1|AAM50784.1|  387|Drosophila melanogaster LD23767p pro...   345   4e-95
AE013599-1830|AAF58289.1|  387|Drosophila melanogaster CG8309-PA...   345   4e-95
AY094791-1|AAM11144.1|  830|Drosophila melanogaster LD20292p pro...    29   6.4  
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    29   6.4  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    29   6.4  
AE014296-3765|AAN11410.1|  830|Drosophila melanogaster CG32350-P...    29   6.4  

>AY118924-1|AAM50784.1|  387|Drosophila melanogaster LD23767p
           protein.
          Length = 387

 Score =  345 bits (849), Expect = 4e-95
 Identities = 158/226 (69%), Positives = 191/226 (84%)
 Frame = +2

Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
           +Q  ELR+YFK LGAEIS EKS KG+EDDLHKI+GVCD CFK+   S I+ ILNSIVSIM
Sbjct: 14  EQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPSQIDGILNSIVSIM 73

Query: 299 VSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 478
           ++IPL+RGEN++LA+ +++TKAP   LG V LQSLWRL+NNL+  SPLRYHVYYH++++A
Sbjct: 74  ITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASPLRYHVYYHLVQVA 133

Query: 479 ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTY 658
            +   V EVF+GV+QL+ +FANCPPS+EQMQKLYRLLH V KD N EL++KVMIELLGTY
Sbjct: 134 KQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVMIELLGTY 193

Query: 659 TDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFXEGELXH 796
           T +NA  AREDA+KCI TALADPNTFLLDPLL+LKPVRF EG+L H
Sbjct: 194 TADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIH 239



 Score = 32.3 bits (70), Expect = 0.90
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 805 LQFXVSEKLSSYXTFYNNHKEFVH 876
           L   VSEKL +Y  FY +H+EFV+
Sbjct: 242 LSIFVSEKLPAYVQFYEDHREFVN 265


>AE013599-1830|AAF58289.1|  387|Drosophila melanogaster CG8309-PA
           protein.
          Length = 387

 Score =  345 bits (849), Expect = 4e-95
 Identities = 158/226 (69%), Positives = 191/226 (84%)
 Frame = +2

Query: 119 DQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIM 298
           +Q  ELR+YFK LGAEIS EKS KG+EDDLHKI+GVCD CFK+   S I+ ILNSIVSIM
Sbjct: 14  EQVQELRKYFKKLGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPSQIDGILNSIVSIM 73

Query: 299 VSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVYYHVIELA 478
           ++IPL+RGEN++LA+ +++TKAP   LG V LQSLWRL+NNL+  SPLRYHVYYH++++A
Sbjct: 74  ITIPLDRGENIVLAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASPLRYHVYYHLVQVA 133

Query: 479 ARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTY 658
            +   V EVF+GV+QL+ +FANCPPS+EQMQKLYRLLH V KD N EL++KVMIELLGTY
Sbjct: 134 KQCEQVLEVFSGVDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTNLELSSKVMIELLGTY 193

Query: 659 TDENASYAREDAIKCIATALADPNTFLLDPLLTLKPVRFXEGELXH 796
           T +NA  AREDA+KCI TALADPNTFLLDPLL+LKPVRF EG+L H
Sbjct: 194 TADNACVAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGDLIH 239



 Score = 32.3 bits (70), Expect = 0.90
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 805 LQFXVSEKLSSYXTFYNNHKEFVH 876
           L   VSEKL +Y  FY +H+EFV+
Sbjct: 242 LSIFVSEKLPAYVQFYEDHREFVN 265


>AY094791-1|AAM11144.1|  830|Drosophila melanogaster LD20292p
           protein.
          Length = 830

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +2

Query: 524 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKC 703
           L K +  C PSN+   +   LLHQ+L+   + LA   +   L   T EN   ++   I  
Sbjct: 486 LSKMYFACTPSNQVPVEEEHLLHQLLEYGPASLAVD-LTTYLNNITFENVKESKN--ILS 542

Query: 704 IATALADPNTF 736
             + LAD N +
Sbjct: 543 FCSILADHNDY 553


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 125  ALELRRYFKSLGAEISEEKSPKGIED 202
            ++ LRR+++ L  E+S+ K P+G+ED
Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 125  ALELRRYFKSLGAEISEEKSPKGIED 202
            ++ LRR+++ L  E+S+ K P+G+ED
Sbjct: 4753 SMVLRRHYRHLREELSKLKPPRGLED 4778


>AE014296-3765|AAN11410.1|  830|Drosophila melanogaster CG32350-PA
           protein.
          Length = 830

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +2

Query: 524 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELAAKVMIELLGTYTDENASYAREDAIKC 703
           L K +  C PSN+   +   LLHQ+L+   + LA   +   L   T EN   ++   I  
Sbjct: 486 LSKMYFACTPSNQVPVEEEHLLHQLLEYGPASLAVD-LTTYLNNITFENVKESKN--ILS 542

Query: 704 IATALADPNTF 736
             + LAD N +
Sbjct: 543 FCSILADHNDY 553


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,570,815
Number of Sequences: 53049
Number of extensions: 637406
Number of successful extensions: 1692
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1692
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)