Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C06
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.59 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    25   0.78 
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    25   0.78 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      25   1.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   4.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   5.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   7.3  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   7.3  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 21/86 (24%), Positives = 40/86 (46%)
 Frame = -2

Query: 365 DEPEGLLVDRQLAQSIYQL*VPVRFDGKSWGC*VVIAKSVSDXYGGPVRCIRESNRP*SG 186
           + P+ +L   ++ Q I  L    R + + W   +  + S +D +   V+  R  ++P  G
Sbjct: 155 NSPQKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF---VKVPRTPDKP--G 209

Query: 185 EGGSLTQHQCR*GQQYNNGCYVRNHR 108
           +G   + H    G  + NGCY+R  +
Sbjct: 210 KGSFWSLHPDS-GNMFENGCYLRRQK 234


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 282 LPIEANGDLELIDRLSKLPVDK 347
           L ++   + E+ +RLS LPVDK
Sbjct: 235 LGMQTTNEKEIFERLSALPVDK 256


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 282 LPIEANGDLELIDRLSKLPVDK 347
           L ++   + E+ +RLS LPVDK
Sbjct: 237 LGMQTTNEKEIFERLSALPVDK 258


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 282 LPIEANGDLELIDRLSKLPVDK 347
           L ++   + E+ +RLS LPVDK
Sbjct: 235 LGMQTTNEKEIFERLSVLPVDK 256


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 282 LPIEANGDLELIDRLSKLPVDK 347
           L ++   + E+ +RLS LPVD+
Sbjct: 237 LGMQTTNEKEIFERLSILPVDE 258


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = +1

Query: 424 TDS*IPSCPVKTLLPP----KQTQTQCRQYRAAGHRTPH 528
           T + IP+ P  +  PP    K+   Q + YR  G+ TPH
Sbjct: 220 TPTGIPT-PSTSASPPTVNIKKESPQMQSYRPTGNITPH 257


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 364 MNQKGCLSTGNLLSLSINSKS-PFASMGSLGVVES 263
           ++Q   LST NLLSLS+   S P  ++   G + S
Sbjct: 457 LSQVPALSTPNLLSLSLAFNSLPTVALEVAGNISS 491


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +3

Query: 336 PVDKQPFWFINWQALEAHRKNP 401
           P  + P WF+ W   +  R  P
Sbjct: 13  PPQEMPTWFVRWLNSQQPRNVP 34


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 322 D*ASCLSTSNPSGSSTGK 375
           D   CLS   PSG   GK
Sbjct: 102 DDEKCLSLERPSGGGKGK 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,664
Number of Sequences: 336
Number of extensions: 4131
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)