Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C06
         (879 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.     31   4.2  
BC014442-1|AAH14442.1|  462|Homo sapiens integrator complex subu...    31   7.3  
AF242524-1|AAF99604.1|  444|Homo sapiens hypothetical nuclear fa...    31   7.3  

>AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.
          Length = 1460

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 169 VSDPPSPDQGRLDSRIHLTGPPXLSETDLAMTTQQPQD 282
           +++PP P  G LDS +   GPP L     A  T+ P++
Sbjct: 418 LAEPPKPPDGSLDSPVPHLGPPFLVPEPEAGGTRAPEE 455


>BC014442-1|AAH14442.1|  462|Homo sapiens integrator complex subunit
           12 protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 180 SFAGSRPIGFPDTPNRTTVXVGDRFGDDDSTTPRLPIEANGDLEL 314
           S A  +P+G       +   +G + G ++STTP +P++    L L
Sbjct: 324 SSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPLKPPPPLTL 368


>AF242524-1|AAF99604.1|  444|Homo sapiens hypothetical nuclear
           factor SBBI22 protein.
          Length = 444

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 180 SFAGSRPIGFPDTPNRTTVXVGDRFGDDDSTTPRLPIEANGDLEL 314
           S A  +P+G       +   +G + G ++STTP +P++    L L
Sbjct: 324 SSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPLKPPPPLTL 368


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,005,018
Number of Sequences: 237096
Number of extensions: 2478580
Number of successful extensions: 5104
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5099
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)