Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C06
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14065-2|CAA74393.1|  497|Caenorhabditis elegans catalase 1 prot...    29   4.4  
X82175-1|CAA57665.1|  500|Caenorhabditis elegans catalase protein.     29   4.4  
AL034488-15|CAA22451.1|  500|Caenorhabditis elegans Hypothetical...    29   4.4  
Y14066-1|CAA74394.1|  497|Caenorhabditis elegans catalase 2 prot...    29   5.8  
U55384-1|AAC14537.1|  496|Caenorhabditis elegans cytosolic catal...    29   5.8  
AL034488-11|CAD31698.1|  512|Caenorhabditis elegans Hypothetical...    29   5.8  
AL034488-5|CAA22458.2|  497|Caenorhabditis elegans Hypothetical ...    29   5.8  
AL132862-30|CAB60565.3|  716|Caenorhabditis elegans Hypothetical...    28   7.7  

>Y14065-2|CAA74393.1|  497|Caenorhabditis elegans catalase 1
           protein.
          Length = 497

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 300 GDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHMQRPNGFID 437
           G+ +L+   + +   + P  F N+  +   ++NPQTH++ PN   D
Sbjct: 137 GNWDLVGNNTPIFFIRDPIHFPNF--IHTQKRNPQTHLKDPNMIFD 180


>X82175-1|CAA57665.1|  500|Caenorhabditis elegans catalase protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 300 GDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHMQRPNGFID 437
           G+ +L+   + +   + P  F N+  +   ++NPQTH++ PN   D
Sbjct: 137 GNWDLVGNNTPIFFIRDPIHFPNF--IHTQKRNPQTHLKDPNMIFD 180


>AL034488-15|CAA22451.1|  500|Caenorhabditis elegans Hypothetical
           protein Y54G11A.5 protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 300 GDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHMQRPNGFID 437
           G+ +L+   + +   + P  F N+  +   ++NPQTH++ PN   D
Sbjct: 137 GNWDLVGNNTPIFFIRDPIHFPNF--IHTQKRNPQTHLKDPNMIFD 180


>Y14066-1|CAA74394.1|  497|Caenorhabditis elegans catalase 2
           protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 378 LEAHRKNPQTHMQRPNGFID 437
           + A ++NPQTHM+ PN   D
Sbjct: 161 IHALKRNPQTHMRDPNALFD 180


>U55384-1|AAC14537.1|  496|Caenorhabditis elegans cytosolic catalase
           protein.
          Length = 496

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 378 LEAHRKNPQTHMQRPNGFID 437
           + A ++NPQTHM+ PN   D
Sbjct: 161 IHALKRNPQTHMRDPNALFD 180


>AL034488-11|CAD31698.1|  512|Caenorhabditis elegans Hypothetical
           protein Y54G11A.13 protein.
          Length = 512

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 378 LEAHRKNPQTHMQRPNGFID 437
           + A ++NPQTHM+ PN   D
Sbjct: 176 IHALKRNPQTHMRDPNALFD 195


>AL034488-5|CAA22458.2|  497|Caenorhabditis elegans Hypothetical
           protein Y54G11A.6 protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 378 LEAHRKNPQTHMQRPNGFID 437
           + A ++NPQTHM+ PN   D
Sbjct: 161 IHALKRNPQTHMRDPNALFD 180


>AL132862-30|CAB60565.3|  716|Caenorhabditis elegans Hypothetical
           protein Y73F8A.1 protein.
          Length = 716

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 798 NFGIRFKSIIIFVIWMKTNKYIYRDVFASVFLLSLNNDLRTIGGCRV 658
           N  +  K+ ++FV W+K  K+I  +   S    +L    + IGG  V
Sbjct: 407 NSYLNIKACVVFVAWVKVFKFISVNKTMSQLSSTLTRSAKDIGGFAV 453


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,128,252
Number of Sequences: 27780
Number of extensions: 399039
Number of successful extensions: 1056
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)