Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_C05
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.3  
AY748845-1|AAV28191.1|  102|Anopheles gambiae cytochrome P450 pr...    23   9.3  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -2

Query: 320  LLCSFLLVGGTVPLLFLHFGHLFRSFS 240
            +LCSFL++   V ++  +F +L R +S
Sbjct: 1410 VLCSFLIINLFVAVIMDNFDYLTRDWS 1436


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 367 GSGIWALQTTQTWTSAFCAAFFWSVALCPCCFFILDIFSAAL 242
           G+ IWA  T + W     A+F   +A    C F    +S A+
Sbjct: 794 GAPIWAEATDRQWCQRMLASFQRPLAQRVVCGFRSISYSVAV 835


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 330  HVCVVCKAQMPDPKTYKQHFENKHPK 407
            H C VC  +       K H + KHP+
Sbjct: 923  HECPVCGQKFTRRDNMKAHCKVKHPE 948


>AY748845-1|AAV28191.1|  102|Anopheles gambiae cytochrome P450
           protein.
          Length = 102

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 321 ALVHVCVVCKAQMPDP 368
           ALV +   CK ++PDP
Sbjct: 69  ALVKILRQCKVELPDP 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,982
Number of Sequences: 2352
Number of extensions: 9721
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)