Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_C05
(570 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068524-1|AAH68524.1| 76|Homo sapiens zinc finger protein 706... 75 2e-13
BC015925-1|AAH15925.1| 76|Homo sapiens zinc finger protein 706... 75 2e-13
AF275809-1|AAG23820.1| 76|Homo sapiens PNAS-113 protein. 75 2e-13
AF275802-1|AAG23816.1| 76|Homo sapiens PNAS-106 protein. 73 9e-13
BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein. 36 0.10
BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein. 36 0.10
AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger pr... 36 0.10
AC022517-1|AAF31271.1| 819|Homo sapiens KIAA0876 protein protein. 31 2.2
AB020683-1|BAA74899.2| 1119|Homo sapiens KIAA0876 protein protein. 31 2.2
AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein. 31 2.9
X71923-1|CAA50739.1| 750|Homo sapiens tenascin-X precursor prot... 30 6.6
U89337-3|AAB47488.1| 4289|Homo sapiens tenascin X protein. 30 6.6
AL772248-1|CAI18078.1| 4222|Homo sapiens tenascin XB protein. 30 6.6
AL662884-1|CAI18332.1| 4222|Homo sapiens tenascin XB protein. 30 6.6
AL662849-16|CAI17471.1| 4222|Homo sapiens tenascin XB protein. 30 6.6
AL662828-1|CAI17414.1| 4222|Homo sapiens tenascin XB protein. 30 6.6
AL645922-1|CAI41718.1| 4222|Homo sapiens tenascin XB protein. 30 6.6
AL049547-2|CAB89296.1| 4288|Homo sapiens dJ34F7.1.1 (tenascin XB... 30 6.6
>BC068524-1|AAH68524.1| 76|Homo sapiens zinc finger protein 706
protein.
Length = 76
Score = 74.9 bits (176), Expect = 2e-13
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3
Query: 297 DQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLKNI 437
DQK AA+ AL++ C VC+ QMPDPKT+KQHFE+KHPK LP +L ++
Sbjct: 28 DQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTPLPPELADV 74
>BC015925-1|AAH15925.1| 76|Homo sapiens zinc finger protein 706
protein.
Length = 76
Score = 74.9 bits (176), Expect = 2e-13
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3
Query: 297 DQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLKNI 437
DQK AA+ AL++ C VC+ QMPDPKT+KQHFE+KHPK LP +L ++
Sbjct: 28 DQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTPLPPELADV 74
>AF275809-1|AAG23820.1| 76|Homo sapiens PNAS-113 protein.
Length = 76
Score = 74.9 bits (176), Expect = 2e-13
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +3
Query: 297 DQKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLKNI 437
DQK AA+ AL++ C VC+ QMPDPKT+KQHFE+KHPK LP +L ++
Sbjct: 28 DQKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTPLPPELADV 74
>AF275802-1|AAG23816.1| 76|Homo sapiens PNAS-106 protein.
Length = 76
Score = 72.5 bits (170), Expect = 9e-13
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +3
Query: 300 QKKAAQKALVHVCVVCKAQMPDPKTYKQHFENKHPKNDLPDDLKNI 437
QK AA+ AL++ C VC+ QMPDPKT+KQHFE+KHPK LP +L ++
Sbjct: 29 QKAAAKAALIYTCTVCRTQMPDPKTFKQHFESKHPKTPLPPELADV 74
>BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein.
Length = 433
Score = 35.9 bits (79), Expect = 0.10
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 303 KKAAQKALVHVCVVCKAQMPDPKTYKQHFE-NKHPKND 413
K+ + +H C VCK P+TYK+H E KH K +
Sbjct: 322 KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKE 359
>BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein.
Length = 615
Score = 35.9 bits (79), Expect = 0.10
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 303 KKAAQKALVHVCVVCKAQMPDPKTYKQHFE-NKHPKND 413
K+ + +H C VCK P+TYK+H E KH K +
Sbjct: 322 KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKE 359
>AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger
protein protein.
Length = 1057
Score = 35.9 bits (79), Expect = 0.10
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 303 KKAAQKALVHVCVVCKAQMPDPKTYKQHFE-NKHPKND 413
K+ + +H C VCK P+TYK+H E KH K +
Sbjct: 300 KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKE 337
>AC022517-1|AAF31271.1| 819|Homo sapiens KIAA0876 protein protein.
Length = 819
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 388 KCCL*VLGS--GIWALQTTQTWTSAFCAAFFWSVALCPC 278
KCCL V S GI + WT + CAA W+ C C
Sbjct: 485 KCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLC 523
>AB020683-1|BAA74899.2| 1119|Homo sapiens KIAA0876 protein protein.
Length = 1119
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 388 KCCL*VLGS--GIWALQTTQTWTSAFCAAFFWSVALCPC 278
KCCL V S GI + WT + CAA W+ C C
Sbjct: 785 KCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLC 823
>AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein.
Length = 902
Score = 31.1 bits (67), Expect = 2.9
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 288 SATDQKKAAQKAL-VHVCVVCKAQMPDPKTYKQHF-ENKHPKND 413
S + KA + L +H C +CK P+TY++H KH K +
Sbjct: 219 SKLPRPKAGPRQLQLHYCDICKISCAGPQTYREHLGGQKHRKKE 262
>X71923-1|CAA50739.1| 750|Homo sapiens tenascin-X precursor
protein.
Length = 750
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 251 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 358
G+D EE + C P E C G C C+ G GPD
Sbjct: 678 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 716
>U89337-3|AAB47488.1| 4289|Homo sapiens tenascin X protein.
Length = 4289
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 251 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 358
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL772248-1|CAI18078.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 251 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 358
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL662884-1|CAI18332.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 251 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 358
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL662849-16|CAI17471.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 251 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 358
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL662828-1|CAI17414.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 251 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 358
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL645922-1|CAI41718.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 251 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 358
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL049547-2|CAB89296.1| 4288|Homo sapiens dJ34F7.1.1 (tenascin XB
(isoform 1)) protein.
Length = 4288
Score = 29.9 bits (64), Expect = 6.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 251 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 358
G+D EE + C P E C G C C+ G GPD
Sbjct: 674 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 712
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,264,081
Number of Sequences: 237096
Number of extensions: 1222384
Number of successful extensions: 2858
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2858
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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