Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_B24
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    45   9e-07
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     26   0.32 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   3.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   3.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.0  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   3.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   4.0  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   9.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.2  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 44.8 bits (101), Expect = 9e-07
 Identities = 33/159 (20%), Positives = 70/159 (44%)
 Frame = +1

Query: 367 GDDILDLVVENADPRYPINLDDFMFKKLGLHQVATVKIVNSTIGYIAPNAFHGVHDLYAV 546
           GD +L L + +A      N      K L  +++  + + N+ +  +  N+FH +  L  V
Sbjct: 14  GDSLLTLKLTHALSSSVQNFPSDAIKIL--NRLEELDLSNNRLRNVPDNSFHFLRSLKKV 71

Query: 547 NLSNNNLKSLHPETFAXXXXXXXXXXXXXXXXFPAAGSENYFLNASSVQELDVSYCNMQY 726
           +L +N ++ +H  TF                       ++ F +   ++++ +    ++ 
Sbjct: 72  HLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNV-QQHTFADLIQLEQIHLDDNRIES 130

Query: 727 ITANTFKNMPGLMYLNVAGNNLSDMDPDTFKKLLDLEXL 843
           +    F N+  L  LN+ GN ++ +  +TF+ L +LE L
Sbjct: 131 LERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDL 169



 Score = 39.9 bits (89), Expect = 2e-05
 Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
 Frame = +1

Query: 454 LHQVATVKIVNSTIGYIAPNAFHG-VH-DLYAVNLSNNNLKSLHPETFAXXXXXXXXXXX 627
           L  +  V + ++TI  I    F G +H DL  V  S N+++++   TFA           
Sbjct: 65  LRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHLD 124

Query: 628 XXXXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSDMDP 807
                   +     F+N  S++ L++    +  I   TF+N+P L  L++A N++S +D 
Sbjct: 125 DNRIE---SLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDF 181

Query: 808 DTFKKL 825
           + F ++
Sbjct: 182 NIFDQV 187



 Score = 34.7 bits (76), Expect = 0.001
 Identities = 17/53 (32%), Positives = 31/53 (58%)
 Frame = +1

Query: 685 SVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSDMDPDTFKKLLDLEXL 843
           S+ +L + +  +   T + F NMP L  L+++ N+L ++D DTF+    L+ L
Sbjct: 249 SLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWL 301



 Score = 29.9 bits (64), Expect = 0.026
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 697 LDVSYCNMQYITANTFKNMPGLMYLNVAGNN 789
           LD+SY  +  I A TFK +P L  LN+  N+
Sbjct: 399 LDLSYNRLGQIDAGTFKGIPRLASLNLGHNS 429


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 259 VLYNEDRPCPRDCI 300
           VL NED PC R C+
Sbjct: 36  VLLNEDNPCARKCV 49


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 104  TTWGQGPGSYYCSWQHARWY 163
            T+W  G  + Y  WQ   W+
Sbjct: 1356 TSWNPGSTTNYPEWQPTEWH 1375


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 214 LLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVSQGYRQAKCSFLEI 351
           LL  +   +   Y + ++ + RP P   I +V+    QA C+F  I
Sbjct: 205 LLITFTSLQIMVYLQHIFVKSRPSPATIISNVTVISWQAVCTFYNI 250


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 214 LLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVSQGYRQAKCSFLEI 351
           LL  +   +   Y + ++ + RP P   I +V+    QA C+F  I
Sbjct: 205 LLITFTSLQIMVYLQHIFVKSRPSPATIISNVTVISWQAVCTFYNI 250


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 214 LLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVSQGYRQAKCSFLEI 351
           LL  +   +   Y + ++ + RP P   I +V+    QA C+F  I
Sbjct: 525 LLITFTSLQIMVYLQHIFVKSRPSPATIISNVTVISWQAVCTFYNI 570


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 649 QEI*GDCLKALEVTASYCSQTSQD 578
           QE+  +   AL+ + S CSQ  QD
Sbjct: 59  QELKNNLADALQTSCSKCSQRQQD 82


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 664 NYFLNASSVQELDVSYCNMQYITANTFKNMPGLM 765
           N FL A+ +   D+S      +  N FK++   M
Sbjct: 371 NMFLKATEMSPTDISLVGFFDVNRNLFKSLLATM 404


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 649 QEI*GDCLKALEVTASYCSQTSQD 578
           QE+  +   AL+ + S CSQ  +D
Sbjct: 59  QELKNNLADALQTSCSKCSQRQKD 82


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 23  HRYYAVQDSKNQV*P 67
           H++Y+ + S+NQV P
Sbjct: 481 HQFYSSESSQNQVAP 495


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 23  HRYYAVQDSKNQV*P 67
           H++Y+ + S+NQV P
Sbjct: 429 HQFYSSESSQNQVAP 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,909
Number of Sequences: 336
Number of extensions: 4100
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)