Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_B22
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 62 5e-10
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 52 4e-07
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 49 5e-06
12_02_1070 - 25814741-25815850 32 0.44
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 29 3.1
07_01_0974 + 8211602-8212051 29 4.1
01_06_0619 - 30650665-30651138 29 4.1
10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 28 7.2
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 28 7.2
12_02_0442 - 19118536-19119222 28 9.6
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 28 9.6
05_04_0272 + 19624898-19625071,19625909-19626370,19626471-196269... 28 9.6
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 28 9.6
02_05_0936 - 32875479-32875573,32875794-32876028,32877752-328778... 28 9.6
>01_05_0108 + 18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 62.1 bits (144), Expect = 5e-10
Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Frame = +2
Query: 98 EGLLHPAWEKQQKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISGETL--PK 271
+GL A +++++F W NS T I+N+ +D RNG L+ +++ I+ ++
Sbjct: 418 DGLSDDAQVSREERSFRLWINS--LGISTYINNVFEDLRNGWVLLEVIDKIAPGSVNWKM 475
Query: 272 PDRG--KMRFHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQ 445
+R K+ F K+ N N+ L LV+I +IV GN K+ L +W ++R+ I
Sbjct: 476 ANRPPIKLPFRKVENCNQVLKIGKELKFSLVNIAGNDIVQGNKKLILAFLWQ-LMRYNIL 534
Query: 446 DI--------SVEEMTAKEGLLLWCQRKTAPY-KNVNVQNF-HLSFKDGLAFCALIHRHR 595
+ + +E+T + +L+W +K K+ +++F S G+ F L+
Sbjct: 535 QLLKNLRFHSNGKEITDND-ILIWANKKVKDSGKHSRMESFKDRSLSSGIFFLNLLGAVE 593
Query: 596 PDLIDYSKLSKDNPLE--NLNTAFDV-XEKYLDIPRMLXPDDLI 718
P ++++S ++K E +N ++ + + L L P+D++
Sbjct: 594 PRVVNWSLVTKGEKDEEKQMNASYIISVARKLGCSIFLLPEDIL 637
>02_05_0540 + 29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 52.4 bits (120), Expect = 4e-07
Identities = 49/217 (22%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Frame = +2
Query: 128 QQKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISGETL-----PKPDRGKMR 292
+++++F W NS + ++N+ +D R+G L+ +L+ +S ++ KP K+
Sbjct: 401 REERSFRMWINS--LGVDSYVNNVFEDVRHGWVLLEVLDKVSPGSVNWKLASKPPI-KLP 457
Query: 293 FHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTII----------LRFAI 442
F K+ N N+ + LV++ +IV GN K+ + ++W ++ LR
Sbjct: 458 FRKLENCNQVVKIGKELKFSLVNLAGNDIVQGNKKLIVALLWQLMRFNMLQLLNRLRSHS 517
Query: 443 QDISVEEMTAKEGLLLWCQRKT-APYKNVNVQNF-HLSFKDGLAFCALIHRHRPDLIDYS 616
Q +E+T + +L W K A + +++F S +G F L+ +P ++++
Sbjct: 518 QGSQGKEITDAD-ILKWANSKVKASGRTSQMESFKDKSLSNGRFFLELLSAVQPRVVNWK 576
Query: 617 KLSK--DNPLENLNTAFDV-XEKYLDIPRMLXPDDLI 718
++K D+ + LN + + + + L P+D+I
Sbjct: 577 VVTKGEDDEEKKLNATYTISVARKIGCSVFLLPEDII 613
Score = 43.6 bits (98), Expect = 2e-04
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 25/196 (12%)
Frame = +2
Query: 203 DDFRNGLKLMLLLEVISGETLPKPDRGKMR----FHKIANVNKALDFIASKGVKLVSIGA 370
D R+G+ L L+ + T+ + K R + + N L+ + G +V+IG
Sbjct: 164 DLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIGCTVVNIGT 223
Query: 371 EEIVDGNLKMTLGMIWTIILRFAIQDISVEE-------------------MTAKEGLLLW 493
+++V+G + LG+I II + D+++++ ++ ++ LL W
Sbjct: 224 QDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELFDDSKDIDEVLSLSPEKMLLRW 283
Query: 494 CQR--KTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSKDNPLENLNTAFDV 667
K A YK V NF KDG A+ L+ P+ + L +P E +
Sbjct: 284 MNHHLKKAGYKKT-VSNFSTDVKDGEAYAYLLKALAPEHSPETTLETKDPSERAKLVLEQ 342
Query: 668 XEKYLDIPRMLXPDDL 715
EK LD R L P D+
Sbjct: 343 AEK-LDCKRYLTPKDI 357
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 134 KKTFTAWCNSHLRKAG--TGIDNIEDDFRNGLKLMLLLEVISGETLPK 271
+K W N HL+KAG + N D ++G LL+ ++ E P+
Sbjct: 277 EKMLLRWMNHHLKKAGYKKTVSNFSTDVKDGEAYAYLLKALAPEHSPE 324
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 48.8 bits (111), Expect = 5e-06
Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 7/204 (3%)
Frame = +2
Query: 128 QQKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISGETLPKPDRGK----MRF 295
++++ F W NS T ++N+ +D R G L+ +L+ IS + K M F
Sbjct: 398 REERAFRLWINS--LGIATYVNNLFEDVRTGWVLLEVLDKISPGIVNWKQASKPPIIMPF 455
Query: 296 HKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAK 475
K+ N N+ ++ +V+I +IV GN K+ L +W ++ +Q + +K
Sbjct: 456 RKVENGNQVIEIGKELKFSVVNISGNDIVQGNKKLILAFLWQLMRTSILQLLKNLRTHSK 515
Query: 476 EGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIH--RHRPDLIDYSKLSKDNPLENL 649
+ + T + N S +G+ F L+H HR + K +D+ +
Sbjct: 516 D------KEITDADILIWANNKDKSIANGVFFLELLHAVNHRHVDLSMVKKGEDDEEKKS 569
Query: 650 NTAFDV-XEKYLDIPRMLXPDDLI 718
N + + + L + P+D++
Sbjct: 570 NATYTISVARKLGCTLFMLPEDIM 593
Score = 35.9 bits (79), Expect = 0.036
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 25/162 (15%)
Frame = +2
Query: 308 NVNKALDFIASK--GVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVE------E 463
N N L ++K G +V+IG +++++ + LG++ II + D++++ E
Sbjct: 198 NENHTLCLNSAKAIGCTVVNIGTQDLIEARPHLVLGLLSQIIKIQLLADLNLKKTPQLAE 257
Query: 464 MTAKEG---------------LLLWCQ--RKTAPYKNVNVQNFHLSFKDGLAFCALIHRH 592
+ A + LL W K A YK V NF KDG A+ L++
Sbjct: 258 LVADDNSKEAEELVTLAPDKMLLKWMNFHLKKAGYKKT-VTNFSTDVKDGEAYAYLLNTL 316
Query: 593 RPDLIDYSKLSKDNPLENLNTAFDVXEKYLDIPRMLXPDDLI 718
P+L + + +P E + EK L+ R + D++
Sbjct: 317 APELSSTTMIETSDPNERAKKVLETAEK-LECTRYVTSKDIV 357
>12_02_1070 - 25814741-25815850
Length = 369
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 122 PRPGVGDPHXPTPPLVPCNRPGTTRHSCLSPRCPSS 15
P P + P P VP + P TT+H L+P PS+
Sbjct: 187 PEPSLSLPLLREPVSVPADEPDTTKHDKLTPPSPST 222
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSPRCPSSWSP 6
SP PG P PP P P + S SP PS +P
Sbjct: 1149 SPPPGSSPPPASPPPSTPSAPPTNSSGSAPSPPSPSQSAP 1188
>07_01_0974 + 8211602-8212051
Length = 149
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 113 GVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
G P P PP VPCN TT + SP
Sbjct: 65 GPSPPTNPAPPAVPCNCGTTTAPAAPSP 92
>01_06_0619 - 30650665-30651138
Length = 157
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 128 VSPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSPRCPSSWSPH 3
V P P GD + P PGT + + R +S PH
Sbjct: 26 VEPHPSGGDVQIGSREATPTVNPGTVKRRAMRSRASASVGPH 67
>10_08_1005 -
22179407-22180122,22180210-22180653,22180737-22180861,
22180939-22181169,22181250-22181805,22181896-22182312,
22182405-22183216,22183653-22183738,22184464-22184534,
22184553-22185573,22186018-22186062,22186252-22186326,
22186797-22186871
Length = 1557
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -2
Query: 580 EGTEGQTVLERQVE-VLDIDILVRRCLTLTPEQQTFLCGHFFN*DVLDGEAENNGPNHTK 404
EG E + ++E V D + L C E QT G VLDG+ +N+ +
Sbjct: 453 EGAEHTYCMRVKLEKVPDGEWLCEECCLKEDENQTRSNGGTSRNKVLDGKNQNSESTNNS 512
Query: 403 SHLKVTIDD 377
LKV + D
Sbjct: 513 KTLKVVVTD 521
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 431 RFAIQDISVEEMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKD 559
R + D E + K+ WC R+ PY+ ++V +F +FK+
Sbjct: 427 RKGVADFLQEVTSRKDQHQYWC-RRDEPYRYISVNDFSEAFKE 468
>12_02_0442 - 19118536-19119222
Length = 228
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 282 PRSGLGRVSPEMTSSSNMSFRPLRKSSSMLSMPVP 178
PR GLGR P ++ S RP+R+ P P
Sbjct: 22 PRQGLGRAKPRSEATRWQSRRPVRRLDRSPDPPPP 56
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 281 GKMRFHKIANVNKALDFIASK 343
G MR HKI +V KAL F+ K
Sbjct: 71 GSMRGHKIESVKKALQFVIMK 91
>05_04_0272 +
19624898-19625071,19625909-19626370,19626471-19626905,
19626992-19627237,19627318-19628085,19628245-19628417,
19629337-19629440,19629525-19630127,19630210-19630214
Length = 989
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 161 SHLRKAGTGIDNIEDDFR-----NGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKAL 325
+H KAG I D R NGL+ LLLE I+ + P ++ K+AN AL
Sbjct: 773 AHGSKAGFPISGFYSDMRKMQNMNGLEGQLLLEPITNDLQPMEKCNSVQSPKVANFT-AL 831
Query: 326 DFIASKGVKLVS 361
+ ++ + VS
Sbjct: 832 HNVDNESMNHVS 843
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 337 GDEVECLVDVSDFVESHFATVGLGQSLAGDDL 242
G V+ + +++ E H A VG GQ+L GDD+
Sbjct: 212 GGGVDGELAIAEAAELHDAVVGRGQALHGDDV 243
>02_05_0936 -
32875479-32875573,32875794-32876028,32877752-32877848,
32878863-32878927,32879506-32879571,32879735-32879842,
32880169-32880303,32880582-32880647,32881172-32881222,
32881312-32881386,32881834-32881896,32882694-32882783,
32882903-32883100,32883189-32883315,32883482-32884100,
32884228-32884265,32884651-32884718,32885056-32885100,
32885243-32885302,32885510-32885593,32885677-32885868,
32887361-32887663
Length = 959
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 623 SKDNPLENLNTAFDVXEKYLDIPRMLXPDDLINH---AQAGRARHY 751
S+D+P E +N D E L+ P + DL+ H +Q +A+ Y
Sbjct: 471 SQDSPSEGINFRSDSHESDLEEPSSIGHGDLVGHNNISQWAKAKKY 516
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,793,556
Number of Sequences: 37544
Number of extensions: 424222
Number of successful extensions: 1602
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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