Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_B22
(779 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 1e-36
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 5e-34
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 97 1e-20
SB_40161| Best HMM Match : CH (HMM E-Value=4.3e-30) 81 1e-15
SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26) 72 5e-13
SB_39164| Best HMM Match : RNB (HMM E-Value=0) 71 8e-13
SB_51904| Best HMM Match : CH (HMM E-Value=0.0058) 71 1e-12
SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-12
SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_40303| Best HMM Match : CH (HMM E-Value=5.1e-10) 69 6e-12
SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_45259| Best HMM Match : CH (HMM E-Value=0.00071) 52 7e-07
SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_2412| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_9999| Best HMM Match : CH (HMM E-Value=5.7e-16) 47 1e-05
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 46 3e-05
SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_595| Best HMM Match : CH (HMM E-Value=0) 45 8e-05
SB_47648| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_15403| Best HMM Match : CH (HMM E-Value=0) 40 0.002
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.049
SB_47035| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) 29 3.2
SB_41233| Best HMM Match : RasGAP (HMM E-Value=0.029) 29 5.6
SB_12448| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05) 29 5.6
SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 150 bits (364), Expect = 1e-36
Identities = 87/196 (44%), Positives = 121/196 (61%)
Frame = +2
Query: 131 QKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHKIAN 310
QKKTFT W N+ L K G I ++ ++ R+G L+LLLEV+ LP+ +RG +RFH + N
Sbjct: 39 QKKTFTKWVNNRLLKVGVRILDLYEELRDGENLLLLLEVLCNVKLPR-ERGLLRFHMLQN 97
Query: 311 VNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAKEGLLL 490
V AL+F+ SK +KLV+I +++IVDGN K+TLG+IWTIIL F I D+ VE K
Sbjct: 98 VQTALEFLESKKIKLVNIRSDDIVDGNPKLTLGLIWTIILYFQINDLDVEIAGEK----- 152
Query: 491 WCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSKDNPLENLNTAFDVX 670
VQ+ LS KD L + PDL+D+SKLSK +P N+ AF V
Sbjct: 153 -------------VQD--LSAKDALLHWSKKVTQGPDLVDFSKLSKTSPEANIEYAFHVA 197
Query: 671 EKYLDIPRMLXPDDLI 718
EK L++PR+L +D++
Sbjct: 198 EKELNVPRLLDVEDVV 213
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 141 bits (342), Expect = 5e-34
Identities = 77/210 (36%), Positives = 124/210 (59%), Gaps = 9/210 (4%)
Frame = +2
Query: 119 WEKQQKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISGETLPKPDRGKM-RF 295
W+K Q+ TFT WCN HL+ + ++E D +GLKL+ LL+V+S + LP+ ++ + +
Sbjct: 370 WKKIQQNTFTRWCNEHLKCVKQFVYSLETDLCDGLKLIALLQVLSQKRLPRFNKKPVFKS 429
Query: 296 HKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAI-------QDIS 454
KI NV+ +L FI + ++LV+I A +IV GNLK+ LG+IWT+IL++ I D
Sbjct: 430 QKIENVSISLKFIEDENIRLVNIDASDIVKGNLKLILGLIWTLILKYQISMPYLDDDDDE 489
Query: 455 VEEMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLI-DYSKLSKD 631
+MT K+ LL W + K ++V + NF + DG A L+ P L+ + L
Sbjct: 490 NHKMTPKQALLAWVKSKMP--ESVPMDNFTTHWNDGRAIACLVDAVAPGLLPECEDLDPK 547
Query: 632 NPLENLNTAFDVXEKYLDIPRMLXPDDLIN 721
+ L+N A + + +LDIP++L P D++N
Sbjct: 548 DALQNAQQAMKLAQDWLDIPQVLDPADMVN 577
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 110 bits (264), Expect = 1e-24
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Frame = +2
Query: 119 WEKQQKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRF- 295
W + QK TFT WCN +R++G I ++ F +G+ ++ L+E ++ E K + +F
Sbjct: 38 WIEIQKNTFTNWCNEQIRESGIVITDLAIAFNDGVTIVYLVESVA-EKKCKNCKMNPKFV 96
Query: 296 -HKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTA 472
K+ N +AL + + G++LV+I ++IV+GNLK+ +G+IW +IL + I S +
Sbjct: 97 QDKLENTTQALKLLENDGIQLVNIDNQDIVNGNLKLIMGLIWRLILHYQIS--SSASASG 154
Query: 473 KEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLI-DYSKLSKDNPLENL 649
K+ LLLW + K + N + G+A ALI+ P L+ D+ +++ DN + N+
Sbjct: 155 KQLLLLWLKNALPELK---IGNVTTDWNSGIALAALINFCDPRLMTDWREMNPDNSIANV 211
Query: 650 NTAFDVXEKYLDIPRMLXPD 709
A E IP++L P+
Sbjct: 212 KKAMKCAEDNFRIPQILSPE 231
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 97.5 bits (232), Expect = 1e-20
Identities = 46/109 (42%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Frame = +2
Query: 122 EKQQKKTFTAWCNSHLRKAGTGI--DNIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRF 295
E QKKTFT W N L +AG + ++ +D ++G L+ LLEV++G+ + K +RG MR
Sbjct: 24 EGTQKKTFTKWINIQLSRAGNNVRVGDLFNDLKDGTILIALLEVLTGKKI-KRERGNMRL 82
Query: 296 HKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAI 442
H + NVN A+ + ++L++I +IVDGN KMTLG+IW++I F +
Sbjct: 83 HHLNNVNNAMMILEENDIRLINISNNDIVDGNHKMTLGLIWSVIAHFQV 131
>SB_40161| Best HMM Match : CH (HMM E-Value=4.3e-30)
Length = 144
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = +2
Query: 482 LLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSKDNPLENLNTAF 661
LL WCQ++T YK+V++ + S+KDGLAFCA+IHR RPDL+++ L + N AF
Sbjct: 6 LLKWCQKQTKSYKHVDINDMSSSWKDGLAFCAIIHRFRPDLLNFDSLKPGDTETNCKLAF 65
Query: 662 DVXEKYLDIPRMLXPDDLI 718
+ E+ L IP + +++
Sbjct: 66 ETAEEQLGIPPQISASEMV 84
>SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26)
Length = 589
Score = 72.1 bits (169), Expect = 5e-13
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Frame = +2
Query: 122 EKQQKKTFTAWCNSHLRKAGTGIDNIED---DFRNGLKLMLLLEVISGETLPKPDRGKMR 292
E +K FT W NS L T I+D D ++G L+ LLEV++ + L + +
Sbjct: 116 ENAHRKAFTKWVNSKLADHPTEPCTIKDVVTDLQDGRMLLNLLEVLTRKKLIQDFNHHSK 175
Query: 293 FHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTI----ILRFAIQDISVE 460
+ ++ + + + ++ +I N++ L ++ +++ + S +
Sbjct: 176 SLNLTDLWMLSQKNSFQKKEKGNLRVHKI--NNVERALVLLDECKVEEVMQQEVNAESAK 233
Query: 461 EMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSKDNPL 640
T ++ LL WC+ + Y +V + +F S+++GLAF A++H + P+ DY+++ +
Sbjct: 234 SFTIEKRLLEWCRERLDGY-DVEINDFSSSWQNGLAFSAILHSYNPEAFDYTEVKQMGTT 292
Query: 641 ENLNTAFDVXEKYLDIPRMLXPDDL 715
E L AF E D+PR+L D+
Sbjct: 293 ERLEHAFSXAEDGFDVPRILDASDV 317
>SB_39164| Best HMM Match : RNB (HMM E-Value=0)
Length = 597
Score = 71.3 bits (167), Expect = 8e-13
Identities = 28/61 (45%), Positives = 47/61 (77%)
Frame = +2
Query: 464 MTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSKDNPLE 643
+T K L+ WC+++T+ Y++VNV++ S++DG+A CA+IHR RPDLI++ +L KD+ +
Sbjct: 534 LTGKAALVEWCRQQTSGYRDVNVRDLTHSWRDGMALCAIIHRFRPDLINFEQLCKDDHAK 593
Query: 644 N 646
N
Sbjct: 594 N 594
>SB_51904| Best HMM Match : CH (HMM E-Value=0.0058)
Length = 1187
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 11/97 (11%)
Frame = +2
Query: 338 SKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVE----------EMTAKEGLL 487
+K VK+V I +I DG + LG++W+IILRF +Q++ E + ++ LL
Sbjct: 71 TKLVKMVGINNTDIADGKVMTILGLVWSIILRFQVQEVMNESEPSTPGGSQDFNVEKKLL 130
Query: 488 LWCQRKTAPYKN-VNVQNFHLSFKDGLAFCALIHRHR 595
+WC+ Y++ V +++F +S++DGLAF A+IH HR
Sbjct: 131 IWCEETLDGYEDVVKLKDFTVSWRDGLAFNAIIHAHR 167
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 578 LIHRHRPDLIDYSKLSKDNPLENLNTAFDVXEKYLDIPRMLXPDDL 715
+IH H PDL D+ +L + NL AF+ +P +L P D+
Sbjct: 432 IIHAHGPDLFDFDELIGGDNKTNLEHAFNKAYDEFSVPHLLEPSDI 477
>SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +2
Query: 461 EMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSKDNPL 640
+M+ +L WC+ T YK VN+ NF SF +GLAFCALIH+ PD D+ L +N
Sbjct: 447 QMSVSSLILTWCKDVTEGYKGVNITNFSGSFANGLAFCALIHKFNPDKFDFDSLDPENRH 506
Query: 641 ENLNTAFDVXE 673
N AF+ E
Sbjct: 507 YNFKLAFETGE 517
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 45.2 bits (102), Expect(2) = 2e-12
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 467 TAKEGLLL-WCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSKDNPL 640
+A+ GLLL WC+ Y + + NF +SF DG A C L+H + P L+ S + ++ L
Sbjct: 1202 SARLGLLLKWCRLVCKSY-GLKIDNFTVSFSDGRALCYLLHHYHPALLPLSAIRQETTL 1259
Score = 44.8 bits (101), Expect(2) = 2e-12
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Frame = +2
Query: 188 IDNIEDDFRNGLKLMLLLEVISGE-----TLPKPDRGKMRFHKIANVNKALDFIASKGVK 352
+ NI D R+GL+L ++E++S TL P R KI NV L + GV
Sbjct: 1057 VTNIATDLRDGLRLTRVVELLSHNWRLTSTLRVP--AISRLQKIHNVEVVLKALKDHGVP 1114
Query: 353 L-----VSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAKE 478
+ I IVDG+ + TL ++W II+ F + + EE +E
Sbjct: 1115 VGEGEGSGITPRHIVDGHREKTLNLLWMIIVNFQVNILLSEEKLKEE 1161
>SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/122 (39%), Positives = 66/122 (54%)
Frame = +2
Query: 122 EKQQKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHK 301
E+ QKKTFT W NSHL++ G ++ + D ++G KL+LLLEV+SGE L H
Sbjct: 40 ERVQKKTFTKWINSHLQRVGARVNELYHDLQDGRKLILLLEVLSGEKL---------VH- 89
Query: 302 IANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAKEG 481
+ NV A D + DGN K+TLG+IWTIILRF + + + +
Sbjct: 90 LENVG-AHDIV----------------DGNQKITLGLIWTIILRFQVFYTDTDAIVLMDR 132
Query: 482 LL 487
LL
Sbjct: 133 LL 134
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3
Query: 732 PDERAIMTYVSCYYH 776
PDE++I+TYV+ YYH
Sbjct: 190 PDEKSILTYVAAYYH 204
>SB_40303| Best HMM Match : CH (HMM E-Value=5.1e-10)
Length = 82
Score = 68.5 bits (160), Expect = 6e-12
Identities = 46/105 (43%), Positives = 60/105 (57%)
Frame = +2
Query: 122 EKQQKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFHK 301
E+ QKKTFT W NSHL++ G ++ + D ++G KL+LLLEV+SGE L H
Sbjct: 4 ERVQKKTFTKWINSHLQRVGARVNELYHDLQDGRKLILLLEVLSGEKL---------VH- 53
Query: 302 IANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRF 436
+ NV A D + DGN K+TLG+IWTIILRF
Sbjct: 54 LENVG-AHDIV----------------DGNQKITLGLIWTIILRF 81
>SB_30962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 733
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Frame = +2
Query: 125 KQQKKTFTAWCNSHLRK--AGTGIDNIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFH 298
++Q + +TAW NS L+K I N+ D ++G+ + L+EV++GE+L +
Sbjct: 127 EEQLQAYTAWVNSQLKKRPGSRVIQNLPIDMKDGVAFIQLIEVVAGESLHLNENPTSMAA 186
Query: 299 KIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRF 436
NV++ L F+A +K+ ++EI++G+LK + +I + F
Sbjct: 187 MKDNVDQVLQFMAVNKIKMHHTSSKEILEGSLKAIMRLILALAAHF 232
>SB_45259| Best HMM Match : CH (HMM E-Value=0.00071)
Length = 1032
Score = 51.6 bits (118), Expect = 7e-07
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 509 APYKN-VNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSKDNPLENLNTAFDVXEKYLD 685
A YK+ V +++F S++DGLAF A++H +R L D+ K+ + + L+ AF
Sbjct: 11 ARYKDLVTIRDFSKSWRDGLAFNAILHSYRGSLFDFGKIIQQDTFTRLDNAFSTANLVWS 70
Query: 686 IPRMLXP 706
+P++L P
Sbjct: 71 VPKLLDP 77
>SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Frame = +2
Query: 119 WEKQQKKTFTAWCNSHLRKAG-TGIDNIEDDFRNGLKLMLLLEVISGETLPKP-DRGKMR 292
W Q + +T W N +++ I +I +G L+ +LEV++ E +P + R
Sbjct: 148 WALQGCEDYTIWTNLLMKRGRHRQITDIRKSIGDGQTLVYMLEVLAQEKIPGVYAKPVTR 207
Query: 293 FHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTA 472
K+ N+ + F+ ++ + L I +++DGNLK L + + RF + + T
Sbjct: 208 AQKLENLQLCMSFMGNREINLQGIYVGDLIDGNLKSILALCGNLRRRFEGSSENTPDGTR 267
Query: 473 KEGLLLWCQRKTAPYKNVNVQNFH 544
+TAP +N H
Sbjct: 268 PPSSQSTKTNETAPSYKMNGHTSH 291
>SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +2
Query: 131 QKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISGETL 265
QKKTFT W NS L K+G ++++ +D +G L+ LLE+ISGE +
Sbjct: 52 QKKTFTKWVNSFLDKSGLHVNDLFEDLADGKILISLLEIISGEKI 96
Score = 31.9 bits (69), Expect = 0.60
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +3
Query: 726 PKPDERAIMTYVSCYY 773
P+PD+R++MTYV+ YY
Sbjct: 131 PRPDDRSVMTYVAAYY 146
>SB_2412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 48.4 bits (110), Expect = 6e-06
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = -2
Query: 460 FN*DVLDGEAENNGPNHTKSHLKVTIDDFF--GTN*HKLHTF*GDEVE-CL 317
F+ ++LD + +NNGPNH+K H KV+I DF+ T H + T+ D+V+ CL
Sbjct: 43 FDCNILDSKPQNNGPNHSKGHFKVSIYDFYRAKTQRHVMQTYLPDQVDLCL 93
>SB_9999| Best HMM Match : CH (HMM E-Value=5.7e-16)
Length = 158
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +2
Query: 518 KNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSKDNPLENLNTAFD 664
+ V +QNF S+ DGLA CAL H P+LI Y L + N AF+
Sbjct: 57 RGVEIQNFTTSWADGLAMCALFHNFSPELIPYETLDPKDRTRNWTLAFE 105
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 5/200 (2%)
Frame = +2
Query: 131 QKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLEVISG-ETLPKPDRGKMRFHKIA 307
+++ FT W N +L + + ++++ + + + LEV +G E + K +
Sbjct: 312 RRRAFTKWLNLYLNERLSALNDVIE-LADCAVAAIFLEVATGRELVLHRSCRKASRKRQE 370
Query: 308 NVNKALDFIASK--GVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAI-QDISVEEMTAKE 478
K F+ ++ L + ++I G++ L ++W +I F + Q
Sbjct: 371 GWRKIACFLETEHFSFTLSNQDIDKIAKGSVDAILTLVWNLIEHFLLLQAAKCSGKRRAP 430
Query: 479 GLLLWCQRKTAPYKNVNVQNFHLSFKDGLAFCALIHRHRPDLIDYSKL-SKDNPLENLNT 655
+ P++++N NF ++DG+A C L++ +P LI SK K N
Sbjct: 431 RNASYSTGSVLPHRDIN--NFDTDWRDGMAICELVNALQPGLIPDSKYKEKTNSEATAKI 488
Query: 656 AFDVXEKYLDIPRMLXPDDL 715
IP ++ P DL
Sbjct: 489 GIQTAHDAFGIPLIISPFDL 508
>SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 626 KDNPLENLNTAFDVXEKYLDIPRMLXPD 709
+++PL NLN AFDV E+YLDIPRML P+
Sbjct: 65 QEDPLYNLNKAFDVAEQYLDIPRMLDPE 92
>SB_595| Best HMM Match : CH (HMM E-Value=0)
Length = 905
Score = 44.8 bits (101), Expect = 8e-05
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Frame = +2
Query: 122 EKQQKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLE-----VISGETLPKPDRGK 286
E +++KTF W NS K + N+ D +G+ L L + +++ + + KP K
Sbjct: 671 ETREEKTFRNWINSLGIKPF--VQNLYLDLDDGMILFQLFDQVQPGIVNYDKVNKPPFKK 728
Query: 287 M--RFHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRF---AIQDI 451
M + K+ N N A+ LV +G ++I DGN + L ++W + + +Q
Sbjct: 729 MGAKMKKLENCNYAISVADLLKFSLVGVGGKDINDGNKMLILALLWQTMRAYTLTVLQKC 788
Query: 452 SVEEMTAKEG-LLLWCQRK-TAPYKNVNVQNF-HLSFKDGLAFCALIHRHRPDLIDYSKL 622
+ E E +++W K ++ K + K LI +P I+YS +
Sbjct: 789 AGSEKPVTEAEIVVWVNEKLSSAGKATTITGMKDPEIKTSKCVLDLIDAIKPKAINYSMV 848
Query: 623 S 625
+
Sbjct: 849 N 849
Score = 37.1 bits (82), Expect = 0.016
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Frame = +2
Query: 152 WCNSHLRKAG--TGIDNIEDDFRNGLKLMLLLEVISGETLPKPDRGKMRFH-KIANVNKA 322
W N L AG ++N D + +LL I+ P+ G H ++ K
Sbjct: 561 WFNFQLEDAGHHRRVNNFSSDISDAENYSVLLNKIA-----PPELGIDTPHVSESDPTKL 615
Query: 323 LDFIASKGVKLVS---IGAEEIVDGNLKMTLGMIWTIILRFAIQDISVEEMTAKEGLLLW 493
+ + + K+ + A+++V GN K+ L + + F + EMT E
Sbjct: 616 AELVLTNADKMACRKFVRAKDVVKGNAKLNLAFVCNLFNTFPCLEPVEHEMTDIEET--- 672
Query: 494 CQRKTAPYKN-VN-------VQNFHLSFKDGLAFCALIHRHRPDLIDYSKLSK 628
R+ ++N +N VQN +L DG+ L + +P +++Y K++K
Sbjct: 673 --REEKTFRNWINSLGIKPFVQNLYLDLDDGMILFQLFDQVQPGIVNYDKVNK 723
>SB_47648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +2
Query: 347 VKLVSIGAEEIVDGNLKMTLGMIWTIILRFAI 442
++L++I +IVDGN KMTLG+IW++I F +
Sbjct: 1 IRLINISNNDIVDGNHKMTLGLIWSVIAHFQV 32
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 39.9 bits (89), Expect = 0.002
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Frame = +2
Query: 122 EKQQKKTFTAWCNSHLRKAGTGIDNIEDDFRNGLKLMLLLE-----VISGETLPKPDRGK 286
E +++ T+ W NS G ++ + DF +G+ L + E + E P+ GK
Sbjct: 302 ETREELTYRNWINS--MGCGRYVNWLYSDFFDGIILFKMFEHIRPGCVDWEKKVNPE-GK 358
Query: 287 MRFHK-------IANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQ 445
+ + I N N A+D L+ I ++I +G +TLG+IW ++ +
Sbjct: 359 CKNARMGGKVKCIENCNYAVDLGKQFNFSLIGIQGQDIHEGVQNLTLGLIWQMMRAYTYT 418
Query: 446 DIS----VEEMTAKEGLLLWCQRKTAPYKNVNVQNFHLSFKD-----GLAFCALI----- 583
++ ++ +E ++ W + K ++ N FKD LA LI
Sbjct: 419 LLARLSPDDDHMTEEKIVEWVNKTLQSKKKTHLINKGHGFKDPDISTSLAVLDLIDCISP 478
Query: 584 HRHRPDLIDYSKLSKDNPLENLNTAFDVXEKYLDIPRMLXPDDLI 718
P LI+ LS ++ L N A + K + L P+DL+
Sbjct: 479 KMINPALINPDPLSDEDKLPNAQYAISMARKIGAVVYAL-PEDLV 522
Score = 35.5 bits (78), Expect = 0.049
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Frame = +2
Query: 86 EWXREGLLHPAWEKQQKKTFTAWCNSHLRKAGT-----GIDNIEDD------FRNGLKLM 232
E EG H + K+++ F W NS L++ + ID ED ++G+ L
Sbjct: 32 ESSAEGTKH-SHSKEEQVAFADWINSSLKEDESVHKYLPIDASEDSSDLYEKVKDGILLC 90
Query: 233 LLLEV-----ISGETLPKPDRGKMRFHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLK 397
++ + I + KP H+ N ++ + G LV+IGA ++ +G
Sbjct: 91 KMINLSAPGTIDERVINKPPLKVFTIHE--NQTLVINSALAIGCNLVNIGAGDLAEGKKH 148
Query: 398 MTLGMIWTII 427
+ LG++W +I
Sbjct: 149 LVLGVLWQVI 158
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 602 LIDYSKLSKDNPLENLNTAFDVXEKYLDIPRMLXPDDLI 718
L D+ KLSK+N +EN AF + +++ +IP +L D++
Sbjct: 445 LCDFEKLSKENIVENNTLAFSICDRHFEIPALLDVADMV 483
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 35.5 bits (78), Expect = 0.049
Identities = 12/39 (30%), Positives = 28/39 (71%)
Frame = +2
Query: 599 DLIDYSKLSKDNPLENLNTAFDVXEKYLDIPRMLXPDDL 715
DL++ + +++ + + NL AFD+ +L++P++L P+D+
Sbjct: 51 DLVNIATIAERDNITNLTEAFDLAYTHLNVPKLLEPEDV 89
>SB_47035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 34.3 bits (75), Expect = 0.11
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = -3
Query: 480 PSFAVISSTEMSWMAKRRIMVQIIPRVI-LRLPSTISSAPIDTSFTPFEAMKSSALLT-L 307
PS A I + S AK IM P + P T SSA I T FTP A S L T
Sbjct: 218 PSSAKIMTPFTSSRAK--IMTPFTPSSAEIMTPFTPSSAKIMTPFTPSSAKIMSPLTTSS 275
Query: 306 AILWNRILPRSGLGRVSPEMTSSSNMSFRPLRKSSSMLSMPV 181
A + + + P S ++ +T SS PL SS+ + P+
Sbjct: 276 AKIMSPLTPSS--AKIMSPLTPSSAKIMSPLTTSSAKIMSPL 315
>SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066)
Length = 361
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
SP V H P + PC+ P T H C SP
Sbjct: 56 SPPTAVHPCHSPPTAVRPCHSPPTAVHPCHSP 87
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
SP V H P + PC+ P T H C SP
Sbjct: 196 SPLTAVRPCHSPPNTVRPCHSPPTAVHPCHSP 227
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
SP V H P + PC+ P T H C SP
Sbjct: 226 SPLTAVRPCHSPPNTVRPCHSPPNTVHPCHSP 257
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
SP V H P + PC+ P T H C SP
Sbjct: 236 SPPNTVRPCHSPPNTVHPCHSPPNTVHPCFSP 267
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
SP V H P + PC+ P T H C SP
Sbjct: 6 SPPNTVRPCHSPPTAVHPCHSPPNTVHPCHSP 37
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
SP V H P + PC+ P T H C SP
Sbjct: 76 SPPTAVHPCHSPPNTVRPCHSPLTAVHPCHSP 107
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
SP V H P + PC+ P T H C SP
Sbjct: 86 SPPNTVRPCHSPLTAVHPCHSPPTAVHPCHSP 117
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
SP V H P + PC+ P T H C SP
Sbjct: 36 SPPNTVRPCHSPPNTVRPCHSPPTAVHPCHSP 67
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 125 SPRPGVGDPHXPTPPLVPCNRPGTTRHSCLSP 30
SP V H P + PC+ P T H C SP
Sbjct: 156 SPPNTVRPCHSPPNTVRPCHSPPNTVHPCHSP 187
>SB_41233| Best HMM Match : RasGAP (HMM E-Value=0.029)
Length = 118
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = -2
Query: 664 VESGVQVLEGIVLGEFTVVDEVWPVPVNEGTEGQTVLERQVEVLDIDILVRRCLTL 497
+ S V L+ I+ G TV+ V V N G GQ+ L +E L D+L R L +
Sbjct: 42 IYSKVDQLQEIITGNPTVIRMV--VHFNRGARGQSSLRELLEPLVNDVLNERNLNI 95
>SB_12448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +2
Query: 548 SFKDGLAFCALIHRHRPDLIDYSKLSKDNPLENLNTAFDVXEKYLDIPRMLXPD 709
S KDG F ALIH D Y S PL D K P ++ PD
Sbjct: 82 SEKDGKQFAALIH-EESDSRTYGYTSNGTPLSFAEEKTDATNKSEQEPILVLPD 134
>SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05)
Length = 492
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 538 VLDIDILVRRCLTLTPEQQ 482
VL++DI+V C TL+PE+Q
Sbjct: 129 VLELDIMVTSCHTLSPEEQ 147
>SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4085
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -2
Query: 517 VRRCLTLTPEQQTFLCGHFF---N*DVLDGEAENNGPNHTKSHLKVTIDD 377
+ RCL E + + F+ N D+LD A N PN + HL+ D+
Sbjct: 773 IHRCLEDYLETKRLVFSRFYFLSNEDLLDILANNKNPNAVQPHLRKCFDN 822
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,435,916
Number of Sequences: 59808
Number of extensions: 475092
Number of successful extensions: 1431
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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