Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_B21
         (594 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK130394-1|BAC85341.1|  151|Homo sapiens protein ( Homo sapiens ...    31   2.3  
BC008671-1|AAH08671.2|  160|Homo sapiens transmembrane protein 8...    31   3.1  
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    29   9.4  

>AK130394-1|BAC85341.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26884 fis, clone PRS09279. ).
          Length = 151

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 379 LRFT*NFHITVMFVCYTYIILCTYLFSIIYCYFILFNNIH 260
           L+   + HI   F  YTY+ +C Y+++ IY    +  + H
Sbjct: 6   LKIKSSLHIKAFFYIYTYMCVCVYMYTHIYVCMCVHIHTH 45


>BC008671-1|AAH08671.2|  160|Homo sapiens transmembrane protein 80
           protein.
          Length = 160

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -1

Query: 420 NVKCQQYLDCSIKYYVLHKIST*LLCSFVIHT*YYAHIYLVLFTAILFYLTI 265
           +V  Q     S  YY L+ ++T L+ ++      Y H YLVL  A+LF + I
Sbjct: 33  SVPLQMLFYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGI 84


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -1

Query: 441 LFLF*FENVKCQQYLDCSIKYYVLHKIST*LLCSFVIHT*YYAHIYLVLFTAILFYLTIF 262
           +++F +  +    Y+   I +Y+   I   +     I    Y +IYL +FT I  YL IF
Sbjct: 19  IYIFIYIYIYVYVYIYLYIYFYIFTYIYLYIFIYIYICLYIYLYIYLYIFTYIYIYLHIF 78

Query: 261 I 259
           I
Sbjct: 79  I 79


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = -1

Query: 450 HEKLFLF*FENVKCQQYLDCSIKYYVLHKIST*LLCSFVIHT*YYAHIYLVLFTAILFYL 271
           H   +++ +  +    Y+      Y+   I T +     IH   YA+IY+  +T I  ++
Sbjct: 64  HMHTYVYSYTRICIHMYVHIHAYAYICIFIYTHMHTYMYIHMHAYAYIYVYSYTRICIHI 123

Query: 270 TIFI 259
            IFI
Sbjct: 124 CIFI 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,800,766
Number of Sequences: 237096
Number of extensions: 1079759
Number of successful extensions: 1172
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)