Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_B19
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 30 1.2
U00057-1|AAA50726.2| 347|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 30 1.6
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 2.1
Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 29 3.7
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 28 4.8
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 28 4.8
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 28 4.8
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 4.8
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 4.8
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 8.4
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 27 8.4
AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain (... 27 8.4
>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical
protein C14C10.5 protein.
Length = 1908
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 348 DVENQAMNPTAPMLDYSEDHEFVSANRLNNCYGDEDLVDAKEEEKRR 488
D+ + A LD D E + L N + DED ++A++ +K+R
Sbjct: 23 DLSSSGSVTEAEELDEDIDMEDLDTTELENLHSDEDCLEAEDADKKR 69
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +3
Query: 183 GWRNGRKPRGKVRKST*TFTGNLPSKQLRELEHVRSLSKELQDNLHELETAVRIADV-EN 359
GW ++P ++K + + ++ +EL L KELQ+ E+ V I V N
Sbjct: 1194 GWGEEKEPTTTIQKRDDDWGWDETQEEPKELSEKTELDKELQEAKSEIGRLVEIEKVLNN 1253
Query: 360 QAMNPTAPMLDYSEDHEFVSANRLNNCYGDEDLVDAKEEEK 482
+ ++ L+ E + + L+ ++ VDAK E+K
Sbjct: 1254 RILSLEDQNLELEERLQEMEEELLDEKNKKKE-VDAKVEQK 1293
>U00057-1|AAA50726.2| 347|Caenorhabditis elegans Hypothetical
protein T24G10.2 protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +2
Query: 68 KIN*IRTLYFVQVQTRAVLGMNFELEESLLTQSGPVSERMEKWTEAQRKGQKIDIDVYGK 247
K N ++ V+ TR ++G + E + +R ++W E Q K ++ D+D G
Sbjct: 253 KKNRLKGFGMVKFLTRHIIGTSDMAPEMREEAEAEMDKRRKEWKERQAKKREADLDANGV 312
Query: 248 PSE*TAQGTGTREELE 295
+ +EE+E
Sbjct: 313 ADDEPEPKKPKKEEVE 328
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 408 EFVSANRLNNCYGDEDLVDAKEEEKRR---LTKDGRISLKASRVIEKVVL**RSVKSED 575
E ++ R+ YG E + D KEEEKR+ +D I + ++ + VL + KS D
Sbjct: 364 EAIARKRIRQHYGTETVEDKKEEEKRKKEQRIEDDMIEVSDDEMVLQEVLLETAAKSLD 422
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +3
Query: 270 ELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYSEDHEFVSANRLNNCYGD 449
EL +R +EL+DNL E A +V NQA+ + ++D E R
Sbjct: 1537 ELNDMRVQMEELEDNLQIAEDARLRLEVTNQALKSESDRAISNKDVE-AEEKRRGLLKQI 1595
Query: 450 EDLVDAKEEEKRRLTKDGRIS 512
DL + E EKR K G +S
Sbjct: 1596 RDLENELENEKR--GKSGAVS 1614
>Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical
protein C50F4.1 protein.
Length = 362
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 279 HVRSLSKELQDNLHE-LETAVRIADVENQAMNPTAPMLDYSEDHEFVSANRLNNCYGDED 455
++ S K++Q L E LETAV +V + MNP++ + + + + L + + DE
Sbjct: 153 NIISFKKKIQKELIEVLETAVTTTEVADYFMNPSSVI-----EKVGILTHYLED-WKDE- 205
Query: 456 LVDAKEEEKRRLTKDGRISLKASRVIE 536
DA E+EK + GR++ + R E
Sbjct: 206 --DADEKEKHNVIAHGRLTAEICRFDE 230
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 405 HEFVSANRLNNCYGDE--DLVD-AKEEEKRRLTKDGRISLKASRVIEKVV 545
H+ V N + + + DL++ A EEE R++ D +S K S IEK +
Sbjct: 334 HKLVEENDFSTAHANAFVDLINSAMEEEHRKVDWDAELSQKMSNNIEKCI 383
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 189 RNGRKPRGKVRKST*TFTGNLPSKQLRELEHVRSLSKELQDNLHE 323
R+GR P + S T P+ QL E + +ELQ+ LH+
Sbjct: 61 RHGRSPARRQEISPIRKTRRSPANQLSNYEIAQQKVRELQEELHQ 105
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +1
Query: 97 RSSANTRGFRDELRAGRITAH-PERTRLGEDGEMDGSPEERSENRHRRLRE-TFRVNSSG 270
R + +R + R GR + P R R D D S R + H R R N S
Sbjct: 28 REARRSRSRSRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSS 87
Query: 271 NWNT 282
+W++
Sbjct: 88 HWSS 91
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +1
Query: 97 RSSANTRGFRDELRAGRITAH-PERTRLGEDGEMDGSPEERSENRHRRLRE-TFRVNSSG 270
R + +R + R GR + P R R D D S R + H R R N S
Sbjct: 56 REARRSRSRSRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSS 115
Query: 271 NWNT 282
+W++
Sbjct: 116 HWSS 119
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +1
Query: 97 RSSANTRGFRDELRAGRITAH-PERTRLGEDGEMDGSPEERSENRHRRLRE-TFRVNSSG 270
R + +R + R GR + P R R D D S R + H R R N S
Sbjct: 114 REARRSRSRSRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSS 173
Query: 271 NWNT 282
+W++
Sbjct: 174 HWSS 177
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +1
Query: 97 RSSANTRGFRDELRAGRITAH-PERTRLGEDGEMDGSPEERSENRHRRLRE-TFRVNSSG 270
R + +R + R GR + P R R D D S R + H R R N S
Sbjct: 115 REARRSRSRSRDRRGGRSRSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSS 174
Query: 271 NWNT 282
+W++
Sbjct: 175 HWSS 178
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +3
Query: 252 PSKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYS-EDHEFVSANR 428
P K+ +E + ++ L + + L E + A +A E++A++ A ++ D++++
Sbjct: 1122 PVKKWKEEQKLKELRESGEIELDEDDLAA-VAVEEDEAISSAAKAVETKLSDYDYLVGMA 1180
Query: 429 LNNCYGDEDLVDAKEEEKRRLTKDGRISLKASRVIEK 539
L + EEEK +L K+ + RVIEK
Sbjct: 1181 L---------IKLSEEEKNKLIKESEEKMAEVRVIEK 1208
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +3
Query: 252 PSKQLRELEHVRSLSKELQDNLHELETAVRIADVENQAMNPTAPMLDYS-EDHEFVSANR 428
P K+ +E + ++ L + + L E + A +A E++A++ A ++ D++++
Sbjct: 1122 PVKKWKEEQKLKELRESGEIELDEDDLAA-VAVEEDEAISSAAKAVETKLSDYDYLVGMA 1180
Query: 429 LNNCYGDEDLVDAKEEEKRRLTKDGRISLKASRVIEK 539
L + EEEK +L K+ + RVIEK
Sbjct: 1181 L---------IKLSEEEKNKLIKESEEKMAEVRVIEK 1208
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 145 RITAHPERTRLG-EDGEMDGSPEE-RSENRHRRLRETFRV 258
+I HPE+T++G + +MD E RS + H LR+ R+
Sbjct: 686 KILEHPEKTKIGASEVDMDCVIETMRSTHNHHLLRDCLRL 725
>AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 30 protein.
Length = 238
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 414 VSANRLNNCY--GDEDLVDAKEEEKRRLTKDGR 506
+ NR +CY G L E+KR+L KDG+
Sbjct: 98 IELNRCKDCYTEGKARLAIVMSEKKRKLRKDGK 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,193,044
Number of Sequences: 27780
Number of extensions: 253858
Number of successful extensions: 930
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -