Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_B18
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical... 37 0.018
AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical... 37 0.018
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 32 0.51
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 30 2.0
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 30 2.0
AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical ... 30 2.0
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 29 2.7
AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical... 29 3.6
U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical pr... 29 4.7
U80452-3|AAB37861.1| 339|Caenorhabditis elegans Hypothetical pr... 28 6.2
U64833-3|AAB04816.2| 211|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF016657-5|AAB93661.3| 278|Caenorhabditis elegans Hypothetical ... 28 8.2
>AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical
protein H06I04.1b protein.
Length = 428
Score = 36.7 bits (81), Expect = 0.018
Identities = 31/144 (21%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Frame = +1
Query: 214 DDAQSVQTXRTNMATKQSSVADTXAELAELVKRKAEVAETLANLERQIYAFEGSYLEDTQ 393
D + V++ R+ +Q +A+ E+ L++ K E+ LE++ + + E +
Sbjct: 176 DLEKEVRSGRSRFLEQQELLAEMSREMDILLREKLEMQRNSQELEKKYKKAKFASRELAK 235
Query: 394 LYGNIIRGWDRYLTTNKSTXSKADK--RNRKFKEAERLFSKSSITS-MAAVSGLVDAAEA 564
+ N + G T+N D+ + E R S+ I + + + +D +EA
Sbjct: 236 ILENDLCGTPT--TSNLKNFESDDEFFEEKSLFEKSRALSRQQIPNDLLEKTRKIDFSEA 293
Query: 565 KNERNSETESQTNEDSSDTQISSN 636
KN +N + + +++ + QIS N
Sbjct: 294 KNAKNQDLIDKLIDENENLQISLN 317
>AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical
protein H06I04.1a protein.
Length = 456
Score = 36.7 bits (81), Expect = 0.018
Identities = 31/144 (21%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Frame = +1
Query: 214 DDAQSVQTXRTNMATKQSSVADTXAELAELVKRKAEVAETLANLERQIYAFEGSYLEDTQ 393
D + V++ R+ +Q +A+ E+ L++ K E+ LE++ + + E +
Sbjct: 176 DLEKEVRSGRSRFLEQQELLAEMSREMDILLREKLEMQRNSQELEKKYKKAKFASRELAK 235
Query: 394 LYGNIIRGWDRYLTTNKSTXSKADK--RNRKFKEAERLFSKSSITS-MAAVSGLVDAAEA 564
+ N + G T+N D+ + E R S+ I + + + +D +EA
Sbjct: 236 ILENDLCGTPT--TSNLKNFESDDEFFEEKSLFEKSRALSRQQIPNDLLEKTRKIDFSEA 293
Query: 565 KNERNSETESQTNEDSSDTQISSN 636
KN +N + + +++ + QIS N
Sbjct: 294 KNAKNQDLIDKLIDENENLQISLN 317
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/100 (24%), Positives = 43/100 (43%)
Frame = +1
Query: 427 YLTTNKSTXSKADKRNRKFKEAERLFSKSSITSMAAVSGLVDAAEAKNERNSETESQTNE 606
Y T + ST S A + S+I+ +A + + + TES T
Sbjct: 602 YSTLSGSTGSTASPGTTE-SSGSSTSGPSTISGSSASTVTGSTVTEASTISGSTESSTIP 660
Query: 607 DSSDTQISSNLNLGGLNHTTIHGSTESIASKPSGKQNTNG 726
S+++ +S + G + +T+ GSTES ++ S + G
Sbjct: 661 GSTESTVSEASTVSGSSVSTVSGSTESTSAGASTVSGSTG 700
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +1
Query: 430 LTTNKSTXSKADKRNRKFKEAERLFSKSSITSMAAVSGLVDAAEAKNERNSETESQTNED 609
L T K+ + A++RN K + + + ++ ++G ++ + +NE + + +T+++
Sbjct: 904 LETEKANLADAEERNEKLNQLKATLE----SKLSDITGQLEDMQERNEDLARQKKKTDQE 959
Query: 610 SSDTQ 624
SDT+
Sbjct: 960 LSDTK 964
>Z66511-3|CAC42276.1| 712|Caenorhabditis elegans Hypothetical
protein F07A11.2b protein.
Length = 712
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +1
Query: 220 AQSVQTXRTNMATKQSSVADTXAELAELVKRKAEVAETLANLERQIY 360
A ++ R +MA ++ + D +L EL++ ++ E + ++ +QIY
Sbjct: 519 ALTLSDDRISMAKRREEIIDALNDLPELIREVLQLDEKVLDIAKQIY 565
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +1
Query: 220 AQSVQTXRTNMATKQSSVADTXAELAELVKRKAEVAETLANLERQIY 360
A ++ R +MA ++ + D +L EL++ ++ E + ++ +QIY
Sbjct: 532 ALTLSDDRISMAKRREEIIDALNDLPELIREVLQLDEKVLDIAKQIY 578
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/65 (21%), Positives = 36/65 (55%)
Frame = +1
Query: 430 LTTNKSTXSKADKRNRKFKEAERLFSKSSITSMAAVSGLVDAAEAKNERNSETESQTNED 609
L T K+ + A++RN K + + + ++ ++G ++ + +NE + + +T+++
Sbjct: 904 LETEKANLADAEERNEKLNQLKATLE----SKLSDITGQLEDMQERNEDLARQKKKTDQE 959
Query: 610 SSDTQ 624
SDT+
Sbjct: 960 LSDTK 964
>AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical
protein C08G5.1 protein.
Length = 882
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Frame = +1
Query: 223 QSVQTXRTNMATKQSSVADTXAELAELVKRKAEVAETLANL--ERQIYAFEGSYL----- 381
Q+V ++N+ Q ++ D+ + LAE +K V ETL NL RQ+ + +L
Sbjct: 284 QNVTVDKSNLEAVQKNL-DSLSSLAEDLKTNLHVIETLYNLFVTRQLPIPDSKFLAGFPK 342
Query: 382 ---EDTQLYGNIIRGWDRYLTTNKSTXSKADKRNRKFKEAERLFSKSSITSMAAVSG 543
+ + ++ ++ GW N++ +AD + + + L +K+ + SG
Sbjct: 343 GISDISMIFTDLFTGW-----VNETVAGQADNLGKALNQLKTLANKAENVDKSFQSG 394
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 91 GNKWHISVQKKNTPVLSDLLWNYKTQVTTIISMVISPQSPIDDAQSVQTXRTNMATKQSS 270
G +W I+++K TP + D +W T I+ +I Q DD +S+ N+ K S
Sbjct: 90 GGRWLITIEKGRTPEIMDTIW------TEILMAMIGEQFS-DDIESLCGIVCNVRGKGSK 142
Query: 271 VA 276
++
Sbjct: 143 IS 144
>AC006651-12|AAM48541.1| 231|Caenorhabditis elegans Hypothetical
protein H06I04.1c protein.
Length = 231
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Frame = +1
Query: 289 ELAELVKRKAEVAETLANLERQIYAFEGSYLEDTQLYGNIIRGWDRYLTTNKSTXSKADK 468
E+ L++ K E+ LE++ + + E ++ N + G T+N D+
Sbjct: 4 EMDILLREKLEMQRNSQELEKKYKKAKFASRELAKILENDLCGTPT--TSNLKNFESDDE 61
Query: 469 --RNRKFKEAERLFSKSSITS-MAAVSGLVDAAEAKNERNSETESQTNEDSSDTQISSN 636
+ E R S+ I + + + +D +EAKN +N + + +++ + QIS N
Sbjct: 62 FFEEKSLFEKSRALSRQQIPNDLLEKTRKIDFSEAKNAKNQDLIDKLIDENENLQISLN 120
>U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical
protein K07C11.9 protein.
Length = 642
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +1
Query: 271 VADTXAELAELVKRKAEVAETLAN-LERQIYAFEGSYLEDTQLYGNIIRGWDRYLTTNKS 447
+AD L E + + V L N LER YL + + NI++ +D S
Sbjct: 35 IADFITPLVEDMNLDSNVDRKLHNKLERYELRLNKEYLSEFEKINNIVQKFDELCVKMNS 94
Query: 448 TXSKADKRNR--KFKEAERLFSKSSITSMAA 534
T + K+ KFK + + +S+ A
Sbjct: 95 TCTNLSKQMETVKFKSVDLVQKTASLKEKKA 125
>U80452-3|AAB37861.1| 339|Caenorhabditis elegans Hypothetical
protein C16C8.17 protein.
Length = 339
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 589 ESQTNEDSSDTQISSNLNLGGL-NHTTIHGSTESIASKPSGKQNTNG 726
ES N+ S Q + N G + ++ IH T + A+ P G N NG
Sbjct: 255 ESDLNDGCSKRQATCEANPGTMCSNFQIHAETSAGATVPVGSWNANG 301
>U64833-3|AAB04816.2| 211|Caenorhabditis elegans Hypothetical
protein B0507.4 protein.
Length = 211
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 442 KSTXSKADKRNRKFKEAERLFSKSSITSMAAVSGLVDAAEAKNERNSETE 591
+++ KAD N ++E LFS I+ + VS L KNE +S+ E
Sbjct: 136 RNSLDKADMSNDWYEETRALFSNIKISDIPTVSQL--RKICKNESHSDYE 183
>AF016657-5|AAB93661.3| 278|Caenorhabditis elegans Hypothetical
protein C16C4.4 protein.
Length = 278
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +1
Query: 550 DAAEAKNERNSETESQTNEDSSDTQISSN-----LNLGGLNHT 663
D + ++NE + +ES + DSS + +N+GG N+T
Sbjct: 232 DESSSENEEDDSSESHSENDSSSDNLEDEFSECVINVGGQNYT 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.126 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,335,042
Number of Sequences: 27780
Number of extensions: 248758
Number of successful extensions: 508
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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