Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_B15
         (562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    26   0.97 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.0  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.0  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   9.0  

>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 25.8 bits (54), Expect = 0.97
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 469 KQFTTKSMLSLVPVTMPMFTPSHK 398
           ++  +  +L+ VPV +P  TP+HK
Sbjct: 16  RRLVSAGLLARVPVKVPNLTPAHK 39


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 178 SASLLPVYCQRYPT 219
           S+  LP+Y  RYPT
Sbjct: 3   SSPALPLYASRYPT 16


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 178 SASLLPVYCQRYPT 219
           S+  LP+Y  RYPT
Sbjct: 3   SSPALPLYASRYPT 16


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 178 SASLLPVYCQRYPT 219
           S+  LP+Y  RYPT
Sbjct: 3   SSPALPLYASRYPT 16


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,199
Number of Sequences: 2352
Number of extensions: 10280
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)