Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_B14
(829 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein. 33 0.95
AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein. 33 0.95
AK131106-1|BAC85156.1| 1105|Homo sapiens FLJ00395 protein protein. 33 1.7
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 33 1.7
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 33 1.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 1.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 33 1.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 1.7
U57053-1|AAC50726.1| 401|Homo sapiens myosin-ID protein. 31 5.1
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 31 5.1
BC028071-1|AAH28071.1| 1098|Homo sapiens myosin IF protein. 31 5.1
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 31 5.1
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 31 5.1
AK092877-1|BAC03995.1| 1098|Homo sapiens protein ( Homo sapiens ... 31 5.1
AJ310570-1|CAC83948.1| 1098|Homo sapiens Myosin-1F protein. 31 5.1
AB210037-1|BAE06119.1| 1143|Homo sapiens MYO1F variant protein p... 31 5.1
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 31 5.1
>AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.
Length = 1341
Score = 33.5 bits (73), Expect = 0.95
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 464 KSSRNSGTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKYPTTVPSGG-*IKTPPSRTLE 640
+S+ S + SRSR R +N R SLS PG S +SS T PS G + TPP L+
Sbjct: 632 RSTSESRSRSRSRSRSASSNSRKSLS--PGVSRDSSTSYTETKDPSSGQEVATPPVPQLQ 689
>AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.
Length = 1286
Score = 33.5 bits (73), Expect = 0.95
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 464 KSSRNSGTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKYPTTVPSGG-*IKTPPSRTLE 640
+S+ S + SRSR R +N R SLS PG S +SS T PS G + TPP L+
Sbjct: 577 RSTSESRSRSRSRSRSASSNSRKSLS--PGVSRDSSTSYTETKDPSSGQEVATPPVPQLQ 634
>AK131106-1|BAC85156.1| 1105|Homo sapiens FLJ00395 protein protein.
Length = 1105
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +1
Query: 64 PHKYCQSEV*FRLVDSLVCCDYQCGVVADNDIKMKPLFYIVVTCLILAIKAHPENIEXVK 243
PH Y ++ +R + L+ C+ QC +++ K + + I + A E ++ VK
Sbjct: 129 PHIYALTDNMYR--NMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSAGGEKVQHVK 186
Query: 244 DLPQANEPVLEA 279
D+ + P+LEA
Sbjct: 187 DIILQSNPLLEA 198
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 32.7 bits (71), Expect = 1.7
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Frame = +2
Query: 317 PHVRKTSSSAPLQTFWLPSRTCLVKSTHSSLSKAAP---QRKAALVLS*--RTEKSSRNS 481
P RK S S W SR+ +TH P +R++ S R SR S
Sbjct: 1846 PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS 1905
Query: 482 GTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKYPTTVPSGG*IKTPPSRTLEASRS 652
T RSR R + R S S P + SR + PTT +TPP T SRS
Sbjct: 1906 VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR-SRTPPV-TRRRSRS 1960
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 32.7 bits (71), Expect = 1.7
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Frame = +2
Query: 317 PHVRKTSSSAPLQTFWLPSRTCLVKSTHSSLSKAAP---QRKAALVLS*--RTEKSSRNS 481
P RK S S W SR+ +TH P +R++ S R SR S
Sbjct: 878 PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS 937
Query: 482 GTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKYPTTVPSGG*IKTPPSRTLEASRS 652
T RSR R + R S S P + SR + PTT +TPP T SRS
Sbjct: 938 VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR-SRTPPV-TRRRSRS 992
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 32.7 bits (71), Expect = 1.7
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Frame = +2
Query: 317 PHVRKTSSSAPLQTFWLPSRTCLVKSTHSSLSKAAP---QRKAALVLS*--RTEKSSRNS 481
P RK S S W SR+ +TH P +R++ S R SR S
Sbjct: 1846 PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS 1905
Query: 482 GTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKYPTTVPSGG*IKTPPSRTLEASRS 652
T RSR R + R S S P + SR + PTT +TPP T SRS
Sbjct: 1906 VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR-SRTPPV-TRRRSRS 1960
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 32.7 bits (71), Expect = 1.7
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Frame = +2
Query: 317 PHVRKTSSSAPLQTFWLPSRTCLVKSTHSSLSKAAP---QRKAALVLS*--RTEKSSRNS 481
P RK S S W SR+ +TH P +R++ S R SR S
Sbjct: 369 PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS 428
Query: 482 GTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKYPTTVPSGG*IKTPPSRTLEASRS 652
T RSR R + R S S P + SR + PTT +TPP T SRS
Sbjct: 429 VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR-SRTPPV-TRRRSRS 483
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 32.7 bits (71), Expect = 1.7
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Frame = +2
Query: 317 PHVRKTSSSAPLQTFWLPSRTCLVKSTHSSLSKAAP---QRKAALVLS*--RTEKSSRNS 481
P RK S S W SR+ +TH P +R++ S R SR S
Sbjct: 1894 PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS 1953
Query: 482 GTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKYPTTVPSGG*IKTPPSRTLEASRS 652
T RSR R + R S S P + SR + PTT +TPP T SRS
Sbjct: 1954 VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR-SRTPPV-TRRRSRS 2008
>U57053-1|AAC50726.1| 401|Homo sapiens myosin-ID protein.
Length = 401
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 64 PHKYCQSEV*FRLVDSLVCCDYQCGVVADNDIKMKPLFYIVVTCLILAIKAHPENIEXVK 243
PH Y ++ +R + L+ C+ QC +++ K + + I + E ++ VK
Sbjct: 42 PHIYALTDNMYR--NMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGGGEKVQHVK 99
Query: 244 DLPQANEPVLEA 279
D+ + P+LEA
Sbjct: 100 DIILQSNPLLEA 111
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 31.1 bits (67), Expect = 5.1
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +2
Query: 404 SLSKAAPQRKAALVLS*RTEKSSRNSGTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKY 583
S SK+ P+ R+ + SRSR R N + + +K RS + SR
Sbjct: 245 SKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSK-SRSRSQSRSNS 303
Query: 584 PTTVP--SGG*IKTPPSRTLEASRSSAK 661
P VP + PP R SRS ++
Sbjct: 304 PLPVPPSKARSVSPPPKRATSRSRSRSR 331
>BC028071-1|AAH28071.1| 1098|Homo sapiens myosin IF protein.
Length = 1098
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 64 PHKYCQSEV*FRLVDSLVCCDYQCGVVADNDIKMKPLFYIVVTCLILAIKAHPENIEXVK 243
PH Y ++ +R + L+ C+ QC +++ K + + I + E ++ VK
Sbjct: 84 PHIYALTDNMYR--NMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGGGEKVQHVK 141
Query: 244 DLPQANEPVLEA 279
D+ + P+LEA
Sbjct: 142 DIILQSNPLLEA 153
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 31.1 bits (67), Expect = 5.1
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +2
Query: 404 SLSKAAPQRKAALVLS*RTEKSSRNSGTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKY 583
S SK+ P+ R+ + SRSR R N + + +K RS + SR
Sbjct: 245 SKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSK-SRSRSQSRSNS 303
Query: 584 PTTVP--SGG*IKTPPSRTLEASRSSAK 661
P VP + PP R SRS ++
Sbjct: 304 PLPVPPSKARSVSPPPKRATSRSRSRSR 331
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 31.1 bits (67), Expect = 5.1
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +2
Query: 404 SLSKAAPQRKAALVLS*RTEKSSRNSGTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKY 583
S SK+ P+ R+ + SRSR R N + + +K RS + SR
Sbjct: 245 SKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSK-SRSRSQSRSNS 303
Query: 584 PTTVP--SGG*IKTPPSRTLEASRSSAK 661
P VP + PP R SRS ++
Sbjct: 304 PLPVPPSKARSVSPPPKRATSRSRSRSR 331
>AK092877-1|BAC03995.1| 1098|Homo sapiens protein ( Homo sapiens
cDNA FLJ35558 fis, clone SPLEN2004984, highly similar to
M.musculus mRNA for myosin I. ).
Length = 1098
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 64 PHKYCQSEV*FRLVDSLVCCDYQCGVVADNDIKMKPLFYIVVTCLILAIKAHPENIEXVK 243
PH Y ++ +R + L+ C+ QC +++ K + + I + E ++ VK
Sbjct: 84 PHIYALTDNMYR--NMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGGGEKVQHVK 141
Query: 244 DLPQANEPVLEA 279
D+ + P+LEA
Sbjct: 142 DIILQSNPLLEA 153
>AJ310570-1|CAC83948.1| 1098|Homo sapiens Myosin-1F protein.
Length = 1098
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 64 PHKYCQSEV*FRLVDSLVCCDYQCGVVADNDIKMKPLFYIVVTCLILAIKAHPENIEXVK 243
PH Y ++ +R + L+ C+ QC +++ K + + I + E ++ VK
Sbjct: 84 PHIYALTDNMYR--NMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGGGEKVQHVK 141
Query: 244 DLPQANEPVLEA 279
D+ + P+LEA
Sbjct: 142 DIILQSNPLLEA 153
>AB210037-1|BAE06119.1| 1143|Homo sapiens MYO1F variant protein
protein.
Length = 1143
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 64 PHKYCQSEV*FRLVDSLVCCDYQCGVVADNDIKMKPLFYIVVTCLILAIKAHPENIEXVK 243
PH Y ++ +R + L+ C+ QC +++ K + + I + E ++ VK
Sbjct: 129 PHIYALTDNMYR--NMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGGGEKVQHVK 186
Query: 244 DLPQANEPVLEA 279
D+ + P+LEA
Sbjct: 187 DIILQSNPLLEA 198
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 31.1 bits (67), Expect = 5.1
Identities = 34/127 (26%), Positives = 47/127 (37%)
Frame = +2
Query: 191 PA*YWQSKPTPRTLXMSRICPKPMSQYLRPKKANLKRG*NVAPHVRKTSSSAPLQTFWLP 370
PA +P P L + R P RP +RG P R+ +P + P
Sbjct: 1013 PAARTMRQPPPPRLALPRRRRSPP----RPPSRPARRGPRPTPQARRRPRPSPRRLLRSP 1068
Query: 371 SRTCLVKSTHSSLSKAAPQRKAALVLS*RTEKSSRNSGTLSRSRMRPL*TNPRNSLSTKP 550
C + +A P+R+ R S S S RP T PR+ S +P
Sbjct: 1069 HSLCSPRLRPGP--RADPRRE-------RASTSPPPRSWPSGSACRPWRTGPRSPPSCQP 1119
Query: 551 GRSGNSS 571
G SG+ S
Sbjct: 1120 GSSGSGS 1126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,012,835
Number of Sequences: 237096
Number of extensions: 2904044
Number of successful extensions: 6692
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6685
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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