Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_B14
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 37 0.020
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 37 0.020
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 34 0.14
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 33 0.25
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 33 0.25
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 33 0.25
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 31 0.76
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 31 0.76
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 31 1.0
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 31 1.0
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 31 1.0
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 1.0
U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 29 5.4
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 29 5.4
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 29 5.4
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 7.1
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 28 7.1
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 28 9.4
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 28 9.4
U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical pr... 28 9.4
U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 36.7 bits (81), Expect = 0.020
Identities = 33/151 (21%), Positives = 66/151 (43%)
Frame = +2
Query: 212 KPTPRTLXMSRICPKPMSQYLRPKKANLKRG*NVAPHVRKTSSSAPLQTFWLPSRTCLVK 391
K P+ SR+ P P+K N K G + R+T + PL+T ++T
Sbjct: 319 KTKPKKEIKSRVSLLPPPAPKAPQKEN-KEGGEMTETPRRTITKTPLKTVNAKAKT---- 373
Query: 392 STHSSLSKAAPQRKAALVLS*RTEKSSRNSGTLSRSRMRPL*TNPRNSLSTKPGRSGNSS 571
S + + +RK V E+ + S+ + P T + + + + ++S
Sbjct: 374 SPTPPVERQKKERKPLYVAPPAKERVEKEKKIPSKPVVSPPTTAEKKPVVSSIPSTSSAS 433
Query: 572 REKYPTTVPSGG*IKTPPSRTLEASRSSAKR 664
+ +PT+ +GG ++ P + ++ +SAK+
Sbjct: 434 KGPFPTSSFAGGKLQGPRKTSSSSTTTSAKK 464
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 36.7 bits (81), Expect = 0.020
Identities = 33/151 (21%), Positives = 66/151 (43%)
Frame = +2
Query: 212 KPTPRTLXMSRICPKPMSQYLRPKKANLKRG*NVAPHVRKTSSSAPLQTFWLPSRTCLVK 391
K P+ SR+ P P+K N K G + R+T + PL+T ++T
Sbjct: 387 KTKPKKEIKSRVSLLPPPAPKAPQKEN-KEGGEMTETPRRTITKTPLKTVNAKAKT---- 441
Query: 392 STHSSLSKAAPQRKAALVLS*RTEKSSRNSGTLSRSRMRPL*TNPRNSLSTKPGRSGNSS 571
S + + +RK V E+ + S+ + P T + + + + ++S
Sbjct: 442 SPTPPVERQKKERKPLYVAPPAKERVEKEKKIPSKPVVSPPTTAEKKPVVSSIPSTSSAS 501
Query: 572 REKYPTTVPSGG*IKTPPSRTLEASRSSAKR 664
+ +PT+ +GG ++ P + ++ +SAK+
Sbjct: 502 KGPFPTSSFAGGKLQGPRKTSSSSTTTSAKK 532
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +2
Query: 206 QSKPTPRTLXMSRICPKPMSQYLRPKKANLKRG*NVAPHVRKTSSSAPLQTFWLPSRTCL 385
Q KP P + S+ P +SQ L+P + L + A V + + +AP++ WL
Sbjct: 4014 QLKPQPTKIGQSKQAPPTISQQLKPLQGELGK---AAKFVIEFAGAAPVKVTWLKDGK-E 4069
Query: 386 VKSTHSSLSKAAP 424
+KST +L P
Sbjct: 4070 IKSTFRTLITTTP 4082
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 209 SKPTPRTLXMSRICPKPMSQYLRPKKANLKRG*NVAPHVRKTSSSAPLQTFWLPSRTCLV 388
+KP P + S+ P +SQ L+P + L + A V + + +AP++ WL +
Sbjct: 3818 NKPQPTKIGQSKQAPPTISQQLKPLQGELGK---AAKFVIEFAGAAPVKVTWLKDGK-EI 3873
Query: 389 KSTHSSLSKAAP 424
KST +L P
Sbjct: 3874 KSTFRTLITTTP 3885
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 209 SKPTPRTLXMSRICPKPMSQYLRPKKANLKRG*NVAPHVRKTSSSAPLQTFWLPSRTCLV 388
+KP P + S+ P +SQ L+P + L + A V + + +AP++ WL +
Sbjct: 4056 NKPQPTKIGQSKQAPPTISQQLKPLQGELGK---AAKFVIEFAGAAPVKVTWLKDGK-EI 4111
Query: 389 KSTHSSLSKAAP 424
KST +L P
Sbjct: 4112 KSTFRTLITTTP 4123
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 209 SKPTPRTLXMSRICPKPMSQYLRPKKANLKRG*NVAPHVRKTSSSAPLQTFWLPSRTCLV 388
+KP P + S+ P +SQ L+P + L + A V + + +AP++ WL +
Sbjct: 4056 NKPQPTKIGQSKQAPPTISQQLKPLQGELGK---AAKFVIEFAGAAPVKVTWLKDGK-EI 4111
Query: 389 KSTHSSLSKAAP 424
KST +L P
Sbjct: 4112 KSTFRTLITTTP 4123
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 212 KPTPRTLXMSRICPKPMSQYLRPKKANLKRG*NVAPHVRKTSSSAPLQTFWLPSRTCLVK 391
+P P + S+ P +SQ L+P + L + A V + + +AP++ WL +K
Sbjct: 3772 RPQPTKIGQSKQAPPTISQQLKPLQGELGK---AAKFVIEFAGAAPVKVTWLKDGK-EIK 3827
Query: 392 STHSSLSKAAP 424
ST +L P
Sbjct: 3828 STFRTLITTTP 3838
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 212 KPTPRTLXMSRICPKPMSQYLRPKKANLKRG*NVAPHVRKTSSSAPLQTFWLPSRTCLVK 391
+P P + S+ P +SQ L+P + L + A V + + +AP++ WL +K
Sbjct: 3788 RPQPTKIGQSKQAPPTISQQLKPLQGELGK---AAKFVIEFAGAAPVKVTWLKDGK-EIK 3843
Query: 392 STHSSLSKAAP 424
ST +L P
Sbjct: 3844 STFRTLITTTP 3854
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 214 AHPENIEXVKDLPQANEPVLEAEESEPQARIERCTTCTQNLKLSSPTDVLAAIKNLPGEV 393
A P V Q N PVL +++S+P + + QNL LSS I +L ++
Sbjct: 1635 AQPSPRPAVAPDSQQNGPVLVSQQSQPSPMSSQQSDMAQNLILSSKD-----INDLAAKL 1689
Query: 394 HTQQSFEGCSTEKGCAGI 447
H +T C+GI
Sbjct: 1690 HKNPEALAQATRGDCSGI 1707
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 214 AHPENIEXVKDLPQANEPVLEAEESEPQARIERCTTCTQNLKLSSPTDVLAAIKNLPGEV 393
A P V Q N PVL +++S+P + + QNL LSS I +L ++
Sbjct: 1926 AQPSPRPAVAPDSQQNGPVLVSQQSQPSPMSSQQSDMAQNLILSSKD-----INDLAAKL 1980
Query: 394 HTQQSFEGCSTEKGCAGI 447
H +T C+GI
Sbjct: 1981 HKNPEALAQATRGDCSGI 1998
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 214 AHPENIEXVKDLPQANEPVLEAEESEPQARIERCTTCTQNLKLSSPTDVLAAIKNLPGEV 393
A P V Q N PVL +++S+P + + QNL LSS I +L ++
Sbjct: 1941 AQPSPRPAVAPDSQQNGPVLVSQQSQPSPMSSQQSDMAQNLILSSKD-----INDLAAKL 1995
Query: 394 HTQQSFEGCSTEKGCAGI 447
H +T C+GI
Sbjct: 1996 HKNPEALAQATRGDCSGI 2013
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 214 AHPENIEXVKDLPQANEPVLEAEESEPQARIERCTTCTQNLKLSSPTDVLAAIKNLPGEV 393
A P V Q N PVL +++S+P + + QNL LSS I +L ++
Sbjct: 1745 AQPSPRPAVAPDSQQNGPVLVSQQSQPSPMSSQQSDMAQNLILSSKD-----INDLAAKL 1799
Query: 394 HTQQSFEGCSTEKGCAGI 447
H +T C+GI
Sbjct: 1800 HKNPEALAQATRGDCSGI 1817
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 214 AHPENIEXVKDLPQANEPVLEAEESEPQARIERCTTCTQNLKLSSPTDVLAAIKNLPGEV 393
A P V Q N PVL +++S+P + + QNL LSS I +L ++
Sbjct: 1635 AQPSPRPAVAPDSQQNGPVLVSQQSQPSPMSSQQSDMAQNLILSSKD-----INDLAAKL 1689
Query: 394 HTQQSFEGCSTEKGCAGI 447
H +T C+GI
Sbjct: 1690 HKNPEALAQATRGDCSGI 1707
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 214 AHPENIEXVKDLPQANEPVLEAEESEPQARIERCTTCTQNLKLSSPTDVLAAIKNLPGEV 393
A P V Q N PVL +++S+P + + QNL LSS I +L ++
Sbjct: 1926 AQPSPRPAVAPDSQQNGPVLVSQQSQPSPMSSQQSDMAQNLILSSKD-----INDLAAKL 1980
Query: 394 HTQQSFEGCSTEKGCAGI 447
H +T C+GI
Sbjct: 1981 HKNPEALAQATRGDCSGI 1998
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 214 AHPENIEXVKDLPQANEPVLEAEESEPQARIERCTTCTQNLKLSSPTDVLAAIKNLPGEV 393
A P V Q N PVL +++S+P + + QNL LSS I +L ++
Sbjct: 1941 AQPSPRPAVAPDSQQNGPVLVSQQSQPSPMSSQQSDMAQNLILSSKD-----INDLAAKL 1995
Query: 394 HTQQSFEGCSTEKGCAGI 447
H +T C+GI
Sbjct: 1996 HKNPEALAQATRGDCSGI 2013
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 214 AHPENIEXVKDLPQANEPVLEAEESEPQARIERCTTCTQNLKLSSPTDVLAAIKNLPGEV 393
A P V Q N PVL +++S+P + + QNL LSS I +L ++
Sbjct: 1745 AQPSPRPAVAPDSQQNGPVLVSQQSQPSPMSSQQSDMAQNLILSSKD-----INDLAAKL 1799
Query: 394 HTQQSFEGCSTEKGCAGI 447
H +T C+GI
Sbjct: 1800 HKNPEALAQATRGDCSGI 1817
>U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical
protein F42A9.7 protein.
Length = 267
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 467 SSRNSGTLSRSRMRPL*TNPRNSLSTKPGRSGNSSR-EKYPTTVPSGG*IKTPPSRTLEA 643
+ R S ++SR + RN S K RSG SSR K + S KT S++ ++
Sbjct: 30 NQRKSQRSTKSRKSSRRSRRRNGRSRKSSRSGKSSRSSKSGRSSKSSNSTKTTGSKSSKS 89
Query: 644 SRS 652
SRS
Sbjct: 90 SRS 92
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +1
Query: 328 QNLKLSSPTDVLAAIKNLPGEVHTQQSFEGCSTEKGCAGIKLKDGKVVEKFGDVESFKNA 507
+ KL L ++ N ++ Q F + C G + G+VV+ V+ N
Sbjct: 95 EKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNL 154
Query: 508 AALDKSKEFTFHQAGTFGKLIEGKIP 585
A DKSK G+L++ K P
Sbjct: 155 AVDDKSKPLAKVLISNCGELVKKKKP 180
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +1
Query: 328 QNLKLSSPTDVLAAIKNLPGEVHTQQSFEGCSTEKGCAGIKLKDGKVVEKFGDVESFKNA 507
+ KL L ++ N ++ Q F + C G + G+VV+ V+ N
Sbjct: 95 EKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNL 154
Query: 508 AALDKSKEFTFHQAGTFGKLIEGKIP 585
A DKSK G+L++ K P
Sbjct: 155 AVDDKSKPLAKVLISNCGELVKKKKP 180
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +1
Query: 328 QNLKLSSPTDVLAAIKNLPGEVHTQQSFEGCSTEKGCAGIKLKDGKVVEKFGDVESFKNA 507
+ KL L ++ N ++ Q F + C G + G+VV+ V+ N
Sbjct: 95 EKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNL 154
Query: 508 AALDKSKEFTFHQAGTFGKLIEGKIP 585
A DKSK G+L++ K P
Sbjct: 155 AVDDKSKPLAKVLISNCGELVKKKKP 180
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +1
Query: 328 QNLKLSSPTDVLAAIKNLPGEVHTQQSFEGCSTEKGCAGIKLKDGKVVEKFGDVESFKNA 507
+ KL L ++ N ++ Q F + C G + G+VV+ V+ N
Sbjct: 95 EKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNL 154
Query: 508 AALDKSKEFTFHQAGTFGKLIEGKIP 585
A DKSK G+L++ K P
Sbjct: 155 AVDDKSKPLAKVLISNCGELVKKKKP 180
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical protein
F26C11.3 protein.
Length = 1317
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +2
Query: 455 RTEKSSRNSGTLSRSRMRPL*TNPRNSLSTKPGRSGNSSREKYPTTVPSGG*IKTPPSRT 634
RTE ++ G S + T P + S+KP + S Y P+GG +T PS
Sbjct: 819 RTETTTDAEGCKKTSSTSKISTTPTSPTSSKPTPTSTSMTTTY--NWPTGGTTRTLPSGE 876
Query: 635 LEASRS 652
+ S S
Sbjct: 877 IILSES 882
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 7 ADGRVVTLSGRCVNIEYRIPHKYCQSEV*FRLVDSLVC 120
ADG V +G+CV E + C +E+ F ++S C
Sbjct: 902 ADGMKVLKNGKCVKDEEWVDPNACDNEIEFTCLNSKKC 939
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 414 FERLLCVDFTRQVLDGSQNVCRGAELEVLRTCGATFY 304
+ + +C + TR L S VC G V +TC A Y
Sbjct: 130 YNKFVCTNGTRMFLRNSTFVCIGVRFFVDKTCAAHDY 166
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 220 PENIEXVKDLPQANEPVLEAEESEPQARIERCTTCTQ-NLKLSSPTDVLAAIKNLPGEVH 396
P N E V +P+ P++ + +PQ ++ + + S+P +A LP EVH
Sbjct: 513 PSNPEPVAVIPEETAPIIPQPKPKPQVHLQPVAPAVRVEVTSSAPAPTIAF--ELPIEVH 570
>U41012-7|AAM75375.1| 639|Caenorhabditis elegans Hypothetical
protein C06A6.2a protein.
Length = 639
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 326 RKTSSSAPLQTFWLPSRTCLVKSTHSSLSKAAPQRKA 436
RKT++ AP+ T W+P R L ++ PQRKA
Sbjct: 457 RKTTN-APIST-WVPPREDLTAKVKDETVQSVPQRKA 491
>U41012-6|AAM75376.1| 642|Caenorhabditis elegans Hypothetical
protein C06A6.2b protein.
Length = 642
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 326 RKTSSSAPLQTFWLPSRTCLVKSTHSSLSKAAPQRKA 436
RKT++ AP+ T W+P R L ++ PQRKA
Sbjct: 457 RKTTN-APIST-WVPPREDLTAKVKDETVQSVPQRKA 491
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,141,502
Number of Sequences: 27780
Number of extensions: 439611
Number of successful extensions: 1302
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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