Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_B12
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   0.56 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   0.56 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   0.56 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.7  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   2.2  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   3.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   6.9  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 448 ISAMRLHKICTGISDPYLYCQLA 380
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 448 ISAMRLHKICTGISDPYLYCQLA 380
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 448 ISAMRLHKICTGISDPYLYCQLA 380
           I A RL   C+G++  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -1

Query: 541 YTQGPASSSYAISIILQPRGLISAFWV*T*EISAMRLHKICTGISD 404
           YT+  A   YAI +IL  R L+S     + + +A  L  I   +SD
Sbjct: 178 YTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIHNLLSD 223


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 416 RYLGPI--LVLPVGSLIASSLYLRPAISNH 333
           RY G I  L+LP+  L      ++ AISNH
Sbjct: 49  RYQGRISSLILPIYGLSTKPKIMQGAISNH 78


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 19/70 (27%), Positives = 25/70 (35%)
 Frame = +3

Query: 444 DISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPSGYYCSYKAVAAGAKTVDGNAYL 623
           D SQV  QN  +            DDE                 + +  GAK +  N  L
Sbjct: 90  DTSQVDDQNESLEASVNENSKNGDDDEGHEWQADVSEEAVRARMQDLTEGAKNMTINDDL 149

Query: 624 EKKLKKRSDL 653
           EK+ K R D+
Sbjct: 150 EKREKDRMDI 159


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 252 PCVELPLQLHLYRVMPQMSTQP 187
           PC ++ + +H  R  P++ TQP
Sbjct: 323 PCPDIIIDVHGTRRGPKIKTQP 344


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 205 TDVNPALVYCFQCIF 161
           TD+ PAL YC   I+
Sbjct: 46  TDLEPALQYCTHLIY 60


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 761 RIIFADNTNLNLGGLEVDRQHLRQTRDGKLNRIIGAE 651
           ++I  D   LNL   E     + +T DG+LN  I A+
Sbjct: 133 KLIDPDLKELNLDTKESYALTVAETADGRLNATIIAD 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,042
Number of Sequences: 336
Number of extensions: 3526
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)