Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_B12
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 224 7e-59
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 107 7e-24
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 85 4e-17
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 76 3e-14
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 7.1
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 7.1
Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 28 7.1
U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein. 28 7.1
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 224 bits (547), Expect = 7e-59
Identities = 98/210 (46%), Positives = 151/210 (71%)
Frame = +3
Query: 195 LTSVAXRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQV*RARY 374
LT+VA +G DAAV+A Q++VPD L+ +VT ++ ++ +GC GMI D++ Q+ RA+
Sbjct: 37 LTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQG 96
Query: 375 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDP 554
EAA+W+YK G ++P +L +++AD++Q YTQNAEMR LGC+++ I+YDDE GP VY+ DP
Sbjct: 97 EAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDP 156
Query: 555 SGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSSEIE 734
+GYY K V+ G K + ++LEKK+KK+S+L++ +AI+LAI L L +D +S ++E
Sbjct: 157 AGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLE 216
Query: 735 IGVVSKDNPXFRVLTETEIDRHLTAIAEKD 824
+ VV+KDN F LT +++ HL IA +D
Sbjct: 217 VVVVTKDNSKFTKLTSDQVEHHLNQIANRD 246
Score = 64.5 bits (150), Expect = 9e-11
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +2
Query: 86 MARESSAGFDRHITIFSPEGRLYQVEYALKAIN 184
M+R SSAGFDRHITIFSPEGR+YQVEYA KAIN
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAIN 33
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 107 bits (258), Expect = 7e-24
Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 3/212 (1%)
Frame = +3
Query: 198 TSVAXRGTDAAVVAAQRKVPDRLLDPASVTH-LFALTDRIGCVMTGMIADSRSQV*RARY 374
T + ++ VVAA+RK +LLD + +T ++ L+D I C + G+ AD+ + R+
Sbjct: 33 TCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRW 92
Query: 375 EAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDP 554
AA+++ YG E+PV L + + + Q YTQ RP G S++ I +D G +Y++DP
Sbjct: 93 WAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDP 152
Query: 555 SGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSSEIE 734
SG Y +KA G+ L+++ K + ++A QLAI L + L V S ++E
Sbjct: 153 SGNYTGWKATCIGSNHQAAVTLLKQEYKSP---NLEEAKQLAIKVLWKTLDVKLASEKVE 209
Query: 735 IGVVSK--DNPXFRVLTETEIDRHLTAIAEKD 824
+ V+++ LT E+D + +K+
Sbjct: 210 MAVLTRRDGKTVLEELTTKEVDALIAEHEKKE 241
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 110 FDRHITIFSPEGRLYQVEYALKAIN 184
+D TIFSPEGRLYQVEYA++AI+
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIS 29
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 106 bits (254), Expect = 2e-23
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 1/205 (0%)
Frame = +3
Query: 192 GLTSVAXRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQV*RAR 371
G SV R D V+A + V L D ++ IGCV +GM D R V +AR
Sbjct: 31 GQPSVGLRAKDGVVLATEN-VGSVLTDDQPKVE--QISKHIGCVYSGMGPDFRILVKKAR 87
Query: 372 YEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAG-PCVYKT 548
A ++ YG E+P L IA + Q YTQ+ +RP G S+++ +D G P +++
Sbjct: 88 KIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQC 147
Query: 549 DPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSSE 728
DPSG Y ++KA A G V+ +LEK+ + +L DD I A+ L + V +
Sbjct: 148 DPSGAYFAWKATALGKNDVNAKTFLEKRFSEALEL--DDGIHTALLTLRESFDVGMNENN 205
Query: 729 IEIGVVSKDNPXFRVLTETEIDRHL 803
+E+ V ++ F LT+ ++ HL
Sbjct: 206 VEVAVC--NSTGFHRLTKQQVHDHL 228
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 122 ITIFSPEGRLYQVEYALKAINQG 190
+T FSP G+L Q+EYAL A+ G
Sbjct: 9 LTTFSPSGKLMQIEYALNAVKNG 31
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 105 bits (253), Expect = 3e-23
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Frame = +3
Query: 186 RAGLTSVAXRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQV*R 365
+ G T+V RG D V+ ++K L D ++ + + D + G+ AD+R V R
Sbjct: 28 KKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDR 87
Query: 366 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYK 545
AR E +++ + V + R IA+ Q +TQ+ RP G SM++ +D + P ++K
Sbjct: 88 ARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFK 147
Query: 546 TDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSS 725
T+PSG Y Y A A G YLE++ + + + ++L + L+QV V S
Sbjct: 148 TEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLAQV--VPPGSQ 205
Query: 726 EIEIGVVSKDNPXF--RVLTETEIDRHLTAI 812
IEI V+ K N RVL+ EI+ L +
Sbjct: 206 NIEIAVMKKVNDELQQRVLSTEEIEALLKVV 236
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +2
Query: 110 FDRHITIFSPEGRLYQVEYALKAINQG 190
+DR ITIFSP+G L+QVEYA +A+ +G
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKG 30
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 85.4 bits (202), Expect = 4e-17
Identities = 59/220 (26%), Positives = 117/220 (53%), Gaps = 11/220 (5%)
Frame = +3
Query: 186 RAGLTSVAXRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQV*R 365
+ G TS+ + ++ ++AA+++ +L+ ++ + + IG G+IADSR+ V R
Sbjct: 32 KLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVER 91
Query: 366 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQN---AEM-RPLGCSMMLIAYDDEAGP 533
A+ EA N+ + Y +I V + + +A+++ + + A M RP G +M+ D E G
Sbjct: 92 AQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQE-GA 150
Query: 534 CVYKTDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVD 713
++ DPSG + KA + GA + DG A K + L+ + +++A++ L QV+
Sbjct: 151 KLFHLDPSGTFIDCKAKSIGAAS-DG-AEQNLKEQYHDALTIKEGLKMALAILKQVMEEK 208
Query: 714 FKSSEIEIGVV-----SKDNP--XFRVLTETEIDRHLTAI 812
S+ +E+ V+ +K P F ++ E+D+ +T++
Sbjct: 209 LNSANVEVVVIKPTVDAKGRPIGEFTRVSNEELDQVITSL 248
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +2
Query: 110 FDRHITIFSPEGRLYQVEYALKAINQGWVDI 202
+DR + FSPEGRL+QVEYA++A+ G I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSI 38
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 76.2 bits (179), Expect = 3e-14
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
Frame = +3
Query: 186 RAGLTSVAXRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQV*R 365
+ G +V + AV+ A ++ + L + ++ + G + G+++D R
Sbjct: 30 KQGSATVGIKSETHAVIVALKRAQNDL--SSHQKKVYEIDTHAGVSIAGLLSDGRILARY 87
Query: 366 ARYEAANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYK 545
+ E ++W++ Y +P+ L + Q TQ RP G +++ YD + G + +
Sbjct: 88 LQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKD-GAHIIQ 146
Query: 546 TDPSGYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVD--FK 719
TDPS S + GA++ YLE+ + + + I A+ L L +
Sbjct: 147 TDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLALRDTLPAEENLN 206
Query: 720 SSEIEIGVVSKDNPXFRVLTETEIDRHLTAIA 815
+ IG+V KD+P F +L + ++ HL ++
Sbjct: 207 AQNTSIGIVGKDSP-FSLLEDAQVAVHLNQVS 237
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/27 (55%), Positives = 24/27 (88%)
Frame = +2
Query: 110 FDRHITIFSPEGRLYQVEYALKAINQG 190
+D +T++SP+GRL+QVEYA++A+ QG
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQG 32
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 66.1 bits (154), Expect = 3e-11
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Frame = +3
Query: 198 TSVAXRGTDAAVVAAQRKVPDRLLDPASVTHLFALTDRIGCVMTGMIADSRSQV*RARYE 377
T +A RG + VV A + + +L + +F + D +G + G D + A E
Sbjct: 36 TMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGE 95
Query: 378 AANWQYKYGSEIPVHILCRRIADISQVYTQNAEMRPLGCSMMLIAYDDEAGPCVYKTDPS 557
A W Y +P+ + +A+ ++T RP G ++++ + G ++ +PS
Sbjct: 96 AMKWLKDYREPMPIQNIANSVAEYIHIHTLGIS-RPFGAGAFFMSWNKQTGGRLFLVEPS 154
Query: 558 GYYCSYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVD-FKSSEIE 734
G YKA A G A +EK K +L + ++ A + V + K+ +IE
Sbjct: 155 GLNYEYKAWAVGKHRQAAKAEIEK--LKIEELDVNQLVKEAARIIMVVRDENKDKNVQIE 212
Query: 735 IGVVSK 752
+G V +
Sbjct: 213 MGWVGE 218
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 107 GFDRHITIFSPEGRLYQVEYALKAIN 184
G+D + FSP+GR++QVEYA KA++
Sbjct: 7 GYDLAASTFSPDGRIFQVEYAQKAVD 32
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 620 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 531
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 620 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 531
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 620 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 531
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 620 ISVSINCLSTSSYSFIGAVVAGGVCFVHTG 531
+ +S+NC S ++ + G+V+ C + TG
Sbjct: 1227 LEISLNCSSDGTWRYTGSVINSVSCIISTG 1256
>Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical
protein ZC168.4 protein.
Length = 361
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 570 SYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSSEIE 734
SYK G N Y KL + S+L TDD ++ I+ + Q VD +SE+E
Sbjct: 310 SYKNFKQGKLVAIKNKYQSSKLAQVSNLMTDDVLE-KINRMGQNAKVD--ASEME 361
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 377 GCQLAVQVWVRDT--CAYLMQTHS*YLSSLHPKCRDET 484
G +V+VW +T CA +TH+ +++++HP R T
Sbjct: 100 GTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVT 137
>U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein.
Length = 361
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 570 SYKAVAAGAKTVDGNAYLEKKLKKRSDLSTDDAIQLAISCLSQVLSVDFKSSEIE 734
SYK G N Y KL + S+L TDD ++ I+ + Q VD +SE+E
Sbjct: 310 SYKNFKQGKLVAIKNKYQSSKLAQVSNLMTDDVLE-KINRMGQNAKVD--ASEME 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,253,533
Number of Sequences: 27780
Number of extensions: 338698
Number of successful extensions: 886
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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