Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_B12
(832 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.040
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 25 0.65
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 3.5
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 3.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 4.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 4.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 4.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 4.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 4.6
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 6.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 6.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 6.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 6.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 8.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 8.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 8.0
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 8.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 8.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 8.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 8.0
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 8.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 8.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 8.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 8.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 8.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 8.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 8.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 8.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 8.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 8.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 8.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 8.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 8.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 8.0
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 8.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 8.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 8.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 8.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 8.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 8.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.5 bits (63), Expect = 0.040
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -2
Query: 141 SGEKIVICLSNPALLSRAILFILISKI 61
SGEKI +C++ LLS+ + F+LIS+I
Sbjct: 263 SGEKIALCIN--ILLSQTMFFLLISEI 287
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 25.4 bits (53), Expect = 0.65
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 141 SGEKIVICLSNPALLSRAILFILISKI 61
SGEK+ +C S LLS + F+L+++I
Sbjct: 277 SGEKVSLCSS--ILLSLTVFFLLLAEI 301
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -2
Query: 141 SGEKIVICLSNPALLSRAILFILISKI 61
SGEK+ + +S LLS + F+L+++I
Sbjct: 268 SGEKVSLSIS--ILLSLTVFFLLLAEI 292
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -2
Query: 141 SGEKIVICLSNPALLSRAILFILISKI 61
SGEK+ + +S LLS + F+L+++I
Sbjct: 264 SGEKVSLSIS--ILLSLTVFFLLLAEI 288
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.0 bits (47), Expect = 3.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 352 LKYNELAMRLPTGSTSMGPRY 414
++YN A TG+ MGP Y
Sbjct: 535 IQYNTRAENHQTGTAKMGPSY 555
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 4.6
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -3
Query: 239 CHYSCICTAXCHRC 198
C Y C A CH C
Sbjct: 737 CRYEAHCFALCHCC 750
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP V + Q+ +R + ++ P FI NAY
Sbjct: 362 MGPFVSIQEQIPRFRYIGPPTSFPRFIPPNAY 393
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP V + Q+ +R + ++ P FI NAY
Sbjct: 362 MGPFVSIQEQIPRFRYIGPPTSFPRFIPPNAY 393
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP V + Q+ +R + ++ P FI NAY
Sbjct: 362 MGPFVSIQEQIPRFRYIGPPTSFPRFIPPNAY 393
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP V + Q+ +R + ++ P FI NAY
Sbjct: 351 MGPFVSIQEQIPRFRYIGPPTSFPRFIPPNAY 382
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + ++ P FI NAY
Sbjct: 132 MGPWISIQEQIPRFRHIGPLTPFPRFIPPNAY 163
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 456 LERYQLCVCIRYAQVSRTHTCTASWQPHSELVILET 349
LER L Q S THT +W+ + IL +
Sbjct: 482 LERLNLIFMSSSLQWSSTHTLDVAWRRKVTIEILNS 517
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 456 LERYQLCVCIRYAQVSRTHTCTASWQPHSELVILET 349
LER L Q S THT +W+ + IL +
Sbjct: 520 LERLNLIFMSSSLQWSSTHTLDVAWRRKVTIEILNS 555
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + ++ P FI NAY
Sbjct: 373 MGPWISIQEQIPRFRHIGPLTPFPRFIPPNAY 404
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 135 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 166
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 143 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 174
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 143 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 174
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
LGP + + Q+ +R + + P FI NAY
Sbjct: 139 LGPWISIQEQIPRFRHIGPSTPFPRFIPPNAY 170
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
LGP + + Q+ +R + + P FI NAY
Sbjct: 139 LGPWISIQEQIPRFRHIGPSTPFPRFIPPNAY 170
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
LGP + + Q+ +R + + P FI NAY
Sbjct: 139 LGPWISIQEQIPRFRHIGPSTPFPRFIPPNAY 170
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
LGP + + Q+ +R + + P FI NAY
Sbjct: 139 LGPWISIQEQIPRFRHIGPSTPFPRFIPPNAY 170
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI+ NAY
Sbjct: 136 MGPWISIQEQIPRFRHIGPSTPFPRFISPNAY 167
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP V + Q+ +R + + P FI NAY
Sbjct: 129 MGPFVSMQEQIPRFRYIGPPTPFPRFIPPNAY 160
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP V + Q+ +R + + P FI NAY
Sbjct: 129 MGPFVSMQEQIPRFRYIGPPTPFPRFIPPNAY 160
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP V + Q+ +R + + P FI NAY
Sbjct: 129 MGPFVSMQEQIPRFRYIGPPTPFPRFIPPNAY 160
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP V + Q+ +R + + P FI NAY
Sbjct: 129 MGPFVSMQEQIPRFRYIGPPTPFPRFIPPNAY 160
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 135 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 166
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 135 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 166
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 135 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 166
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 135 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 166
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 135 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 166
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 135 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 166
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 135 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 166
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 135 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 166
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 351 MGPWISIQEQIPRFRYIGPSTPFPRFIPPNAY 382
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 362 MGPWISIQEQIPRFRYIGPSTPFPRFIPPNAY 393
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + ++ P FI NAY
Sbjct: 362 MGPWISIQEQIPRFRHIGPSTSFPRFIPPNAY 393
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 368 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 399
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 258 LGPCVELPLQLHLYRVMPQMSTQPWFIAFNAY 163
+GP + + Q+ +R + + P FI NAY
Sbjct: 368 MGPWISMQEQIPRFRYIGPSTPFPRFIPPNAY 399
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 374 IASSLYLRPAISNHPGHD 321
+ SSL+ RP+ N+P D
Sbjct: 1901 LRSSLWSRPSTQNNPSSD 1918
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 374 IASSLYLRPAISNHPGHD 321
+ SSL+ RP+ N+P D
Sbjct: 1897 LRSSLWSRPSTQNNPSSD 1914
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,574
Number of Sequences: 438
Number of extensions: 4360
Number of successful extensions: 95
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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