Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_B09
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   7.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   7.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.3  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -1

Query: 586 FPNIYSLILKPLYMWLRVDRNLLKQLGSSKTSSSLVTNM 470
           FPN Y+      Y W   ++  +K L   + +S    NM
Sbjct: 32  FPNFYNDFEVQRYTWKCENQKCVKYLVEDEETSLATCNM 70


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 264 LGQMTDARENVIHLARTPEEKGSEIGIESNYGLD 365
           L + +D     IH     +E+G  I +  N G+D
Sbjct: 308 LKRWSDRIYAAIHQGSVTDERGRSITLTENEGID 341


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 291 NVIHLARTPEEKGSEIGIESNYGLDK 368
           NVI + R+P++   +I ++    LD+
Sbjct: 605 NVIGIGRSPDQNVKKINLKHALDLDR 630


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 556 PLYMWLRVDRNLLK 515
           P Y W++V RN+ K
Sbjct: 195 PTYKWMQVKRNVPK 208


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 556 PLYMWLRVDRNLLK 515
           P Y W++V RN+ K
Sbjct: 195 PTYKWMQVKRNVPK 208


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 556 PLYMWLRVDRNLLK 515
           P Y W++V RN+ K
Sbjct: 195 PTYKWMQVKRNVPK 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,603
Number of Sequences: 336
Number of extensions: 4348
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)