Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_B09
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 44 1e-04
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 44 1e-04
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 44 1e-04
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 44 1e-04
U58753-5|AAC24434.2| 348|Caenorhabditis elegans Hypothetical pr... 31 0.78
AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical... 31 1.0
AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical... 31 1.0
AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical... 31 1.0
AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical... 31 1.0
Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical p... 29 3.1
Z84574-3|CAB06540.2| 172|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr... 28 9.6
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 396 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 554
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 71 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 121
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 396 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 554
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 101 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 151
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 396 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 554
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 103 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 153
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 396 VSEAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYK 554
+ + W++DHA + RMLPGG+ V GI SD+ F D S + TL I K
Sbjct: 71 LEDEWMSDHAERLLRMLPGGIHVVGIAWFSDKKTFSDRK--SHIHKTLGRIQK 121
>U58753-5|AAC24434.2| 348|Caenorhabditis elegans Hypothetical
protein W03B1.6 protein.
Length = 348
Score = 31.5 bits (68), Expect = 0.78
Identities = 24/112 (21%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +3
Query: 402 EAWIADHARHVTRMLPGGMFVQGIFVTSDEDVFEDPNCFSKLRSTLNHIYKGLSINEYMF 581
E W + T ML +FV I V +++ + F K S+L+++ +++++
Sbjct: 18 EKWYLKLSSTSTAMLIAILFVSSIIVIKKDEISNSIDSFGKNISSLDNVTSDMTVDDATK 77
Query: 582 GNCPYSNERLILHMSTSTKVLTCKSLEVGGLNKNTTLKPV-EWKFSPKALSW 734
N ++ + ++ S + T +S+ +G ++ LKP ++K + SW
Sbjct: 78 KNYQWNINDVANLIAPSCEYETVRSIPMGWC-RHKDLKPSGKYKIAMIGNSW 128
>AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1d protein.
Length = 354
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 510 NCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLE 662
N F LR+ L + K +SIN+ +F N P L K TCK L+
Sbjct: 132 NTFKSLRTRLYSLPKTVSINKLVFSNTPECEAEDCLIELMFIKKWTCKQLD 182
>AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1b protein.
Length = 483
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 510 NCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLE 662
N F LR+ L + K +SIN+ +F N P L K TCK L+
Sbjct: 132 NTFKSLRTRLYSLPKTVSINKLVFSNTPECEAEDCLIELMFIKKWTCKQLD 182
>AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1c protein.
Length = 488
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 510 NCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLE 662
N F LR+ L + K +SIN+ +F N P L K TCK L+
Sbjct: 137 NTFKSLRTRLYSLPKTVSINKLVFSNTPECEAEDCLIELMFIKKWTCKQLD 187
>AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1a protein.
Length = 486
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 510 NCFSKLRSTLNHIYKGLSINEYMFGNCPYSNERLILHMSTSTKVLTCKSLE 662
N F LR+ L + K +SIN+ +F N P L K TCK L+
Sbjct: 135 NTFKSLRTRLYSLPKTVSINKLVFSNTPECEAEDCLIELMFIKKWTCKQLD 185
>Z30215-7|CAA82940.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -1
Query: 583 PNIYSLILKPLYMWLRVDRNLLKQLGSSKTSSSLVTNMP*TNIPPGSILVTCRAW 419
P++ +LI + D ++ Q+G S S+ +TN +N+PP ++ V + W
Sbjct: 115 PHLANLIGTKGNSYGSADGEVVHQIGVSTMSAGRITNGNISNLPPPNVPVRTKEW 169
>Z29560-13|CAA82665.1| 322|Caenorhabditis elegans Hypothetical
protein K03H1.10 protein.
Length = 322
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -1
Query: 583 PNIYSLILKPLYMWLRVDRNLLKQLGSSKTSSSLVTNMP*TNIPPGSILVTCRAW 419
P++ +LI + D ++ Q+G S S+ +TN +N+PP ++ V + W
Sbjct: 115 PHLANLIGTKGNSYGSADGEVVHQIGVSTMSAGRITNGNISNLPPPNVPVRTKEW 169
>Z84574-3|CAB06540.2| 172|Caenorhabditis elegans Hypothetical
protein F33E2.4 protein.
Length = 172
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +3
Query: 573 YMFGNCPYSNERLILHMSTSTK-VLTCK 653
Y++ + P NE+LI H T+T+ +LTC+
Sbjct: 122 YLYADTPSVNEQLIKHDLTNTEAILTCQ 149
>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
protein C31E10.8 protein.
Length = 1272
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +3
Query: 462 VQGIFVTSDE---DVFEDPNCFSKLRSTLNHIY--KGLSINEYMFGNCPYSNERLILHMS 626
+QGI+V S E+PN + + LNH Y + S +E+ + + E + ++
Sbjct: 306 LQGIYVDSFGFRISFKEEPNALHYMATKLNHFYANRSKSASEHKYNWKRFLEENDFIDLT 365
Query: 627 TSTKVLTCKSL 659
TK++ K +
Sbjct: 366 PETKIMCRKGI 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,525,815
Number of Sequences: 27780
Number of extensions: 385085
Number of successful extensions: 972
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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