Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_B01
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 122  CSLQYSRCSGNMVPRNC 172
            CS  Y   +G++VP+NC
Sbjct: 1218 CSSFYVCVNGHLVPQNC 1234


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 43  KQRYLXFNIGTRRKSSXMIMCLEHSAMLFTIQSMLR*HGSEKLLSNQTRR 192
           +QR + F I T R        L H A    + +ML    SE++L ++  R
Sbjct: 222 RQRDIRFQIATGRYDETRGTMLSHFAYYVDMANMLTTPLSEEVLLDELLR 271


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -3

Query: 206 IPRVLLLVWFDNSFSEPCYRSIDCIVKSIAECSKHIIXQEDFRLVPILKXRY 51
           I  VL  VWF +     C RSID  +K     S + I +  + +V +    Y
Sbjct: 6   ITDVLKHVWFLSKLFLLCPRSIDEKIKRQERHSFYKIYKYTYNIVAVSLTAY 57


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 191 EVPLVSSKLPSCTDY*P 241
           E+P V    P C DY P
Sbjct: 625 EMPPVPKDFPQCGDYVP 641


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,457
Number of Sequences: 336
Number of extensions: 2714
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)