Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_A22
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein. 29 2.9
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z83105-10|CAB05484.1| 499|Caenorhabditis elegans Hypothetical p... 27 6.8
U00031-7|AAK18870.2| 422|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 27 9.0
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri... 27 9.0
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ... 27 9.0
>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 293 SSSTPSRIRCLTNSISCANCTIPKGNTPRT 382
SS T S +NS SC TI G TPRT
Sbjct: 335 SSGTMSTGTMESNSSSCGTTTITPGGTPRT 364
>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 293 SSSTPSRIRCLTNSISCANCTIPKGNTPRT 382
SS T S +NS SC TI G TPRT
Sbjct: 335 SSGTMSTGTMESNSSSCGTTTITPGGTPRT 364
>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
Length = 1066
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 293 SSSTPSRIRCLTNSISCANCTIPKGNTPRT 382
SS T S +NS SC TI G TPRT
Sbjct: 335 SSGTMSTGTMESNSSSCGTTTITPGGTPRT 364
>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical protein
W08D2.5 protein.
Length = 1256
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 164 RTHSVLMTRESAQLKETTSRNGSQKACRHRAGSALKSRSI 283
RT S L++ E QL TTS+NG K + SAL R I
Sbjct: 1187 RTESTLLSAEGQQLHMTTSKNG--KGGENPHSSALFERLI 1224
>Z83105-10|CAB05484.1| 499|Caenorhabditis elegans Hypothetical
protein F14H3.10 protein.
Length = 499
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 46 TLIALAVVVAARPNDDLFYDKKYDNFNVDEIIDNPRLLKAYTFCFNDKGKCTAE 207
T+IA V V N++LF + K +FNV++ + NP+LL+ K C E
Sbjct: 397 TMIAAQVGVL-HVNEELFDNPK--DFNVEKYLKNPKLLQQVIPFGIGKRSCVGE 447
>U00031-7|AAK18870.2| 422|Caenorhabditis elegans Hypothetical
protein B0361.7 protein.
Length = 422
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 196 CTAE--GNDFKKWIPESLQTSCG-KCSEKQKYLV 288
CT + G+D KK+ PE + CG K S + YLV
Sbjct: 342 CTLQKLGDDLKKYFPEDWEAECGLKTSFQFIYLV 375
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 181 NDKGKCTAEGNDFKKWIPESLQTSCGKCSEKQ 276
+ KG G DF K + T C C EKQ
Sbjct: 526 SSKGITAVTGKDFMKKLGRKSPTCCSCCDEKQ 557
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 181 NDKGKCTAEGNDFKKWIPESLQTSCGKCSEKQ 276
+ KG G DF K + T C C EKQ
Sbjct: 171 SSKGITAVTGKDFMKKLGRKSPTCCSCCDEKQ 202
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 181 NDKGKCTAEGNDFKKWIPESLQTSCGKCSEKQ 276
+ KG G DF K + T C C EKQ
Sbjct: 123 SSKGITAVTGKDFMKKLGRKSPTCCSCCDEKQ 154
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 181 NDKGKCTAEGNDFKKWIPESLQTSCGKCSEKQ 276
+ KG G DF K + T C C EKQ
Sbjct: 851 SSKGITAVTGKDFMKKLGRKSPTCCSCCDEKQ 882
>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
protein 2 protein.
Length = 1262
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +1
Query: 214 DFKKWIPESLQTSCGKCSEKQKYLVAKFVHAIKDKMPDEFDILRKLHDPKGEYTENLDK 390
+ + +I ++ K + +K L+A + ++KD + D + L ++ D KG+ + K
Sbjct: 477 ELQAFIHHTINEPLQKAVKHKKDLLASILQSVKDSISDAGNELNRMTDVKGKKKSSAPK 535
>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
protein.
Length = 1262
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +1
Query: 214 DFKKWIPESLQTSCGKCSEKQKYLVAKFVHAIKDKMPDEFDILRKLHDPKGEYTENLDK 390
+ + +I ++ K + +K L+A + ++KD + D + L ++ D KG+ + K
Sbjct: 477 ELQAFIHHTINEPLQKAVKHKKDLLASILQSVKDSISDAGNELNRMTDVKGKKKSSAPK 535
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,161,880
Number of Sequences: 27780
Number of extensions: 203904
Number of successful extensions: 707
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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