Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_A20
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical ... 153 1e-37
U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical pr... 31 0.73
U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein. 31 0.73
U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinas... 31 0.73
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 31 0.97
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.7
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 30 1.7
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 30 2.2
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 30 2.2
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 30 2.2
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 30 2.2
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 30 2.2
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 30 2.2
U50300-8|AAC48105.1| 646|Caenorhabditis elegans Hypothetical pr... 29 3.9
U40941-9|AAX55692.1| 294|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z92797-4|CAB07238.3| 478|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z92797-3|CAB07237.2| 445|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z83118-3|CAB05577.3| 478|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z83118-2|CAB05576.2| 445|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF099917-2|AAC68785.1| 235|Caenorhabditis elegans Hypothetical ... 28 6.8
>AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical
protein F56H1.5 protein.
Length = 1015
Score = 153 bits (371), Expect = 1e-37
Identities = 71/164 (43%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
Frame = +1
Query: 178 SHRCGLTNEDLNRRWCKPSPVLHPSIYHTKGLIEYLVRVWKKPPLVYCDYHGHSRKKNVF 357
SHRC L DLNR W +P+ LHP ++ TK +I+YL V K P Y D HGHS+K + F
Sbjct: 841 SHRCSLAGIDLNRMWDRPNEALHPEVFATKAIIQYLCEVANKKPFAYVDIHGHSKKWDYF 900
Query: 358 FYGCAGAESWCSSDRL----VQDEPVKYLMLPALMHRISPA-FALGSCSFRVERERESTA 522
YG +ESW + D L Q E +L LP + P+ F C F + R +ES+A
Sbjct: 901 VYGNNASESWRADDVLDVGAAQLEEELHLALPKALEATCPSRFNASECRFNITRAKESSA 960
Query: 523 RVTVWRHLGVTRSYTMEASFCGFDRGPFKGFHLNTQHLQNVGSD 654
RV VWR GV+ +YT+E++FCGF +G G+ +NT L+ +G D
Sbjct: 961 RVNVWRQFGVSTAYTLESTFCGFHKGQNSGYQINTSDLKEIGRD 1004
>U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical
protein EEED8.6 protein.
Length = 459
Score = 76.6 bits (180), Expect = 2e-14
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Frame = +1
Query: 178 SHRCGLTNEDLNRRWCKPSPVLHPSIYHTKGLIEYLVRVWKKPPLVYCDYHGHSRKKNVF 357
++RC L DLNR W PS HPSIY K L+ + ++Y D H HS+K N F
Sbjct: 252 NYRCSLMGHDLNRMWRTPSDWAHPSIYAVKNLLTQYDNNPQAQTVIYVDLHAHSQKPNCF 311
Query: 358 FYGCAGAESWCSSDRLVQDEPVKYLMLPALMHRISPAFALGSCSFRVERERESTARVTVW 537
YG + + + + L LP L+ +S ++L F + E+ T R T+
Sbjct: 312 LYGNVNMSA------VEEKSTFRQLWLPHLLADLSEDYSLEFTQFNTDVEKAGTGRRTMG 365
Query: 538 RHLGVTRSYTMEASFCGFDRGPFKGFHLN--TQHLQ----NVGSDFCEAL 669
L YT+E SF + G + T +LQ +G FC AL
Sbjct: 366 DLLSCL-CYTLEVSFFSYRHTDSSGNGIQHCTPYLQYKYEALGEAFCRAL 414
>Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical
protein F43C1.2a protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 238 VLHPSIYHTKGLIEYLVRVWKKPPLVYCDYHGHSRKKNVFFYGCAGAE 381
V P HT L EY+ W + P + + G+++ +V+ GC AE
Sbjct: 176 VTDPQTDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAE 223
>Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical
protein F43C1.2b protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 238 VLHPSIYHTKGLIEYLVRVWKKPPLVYCDYHGHSRKKNVFFYGCAGAE 381
V P HT L EY+ W + P + + G+++ +V+ GC AE
Sbjct: 244 VTDPQTDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAE 291
>U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 238 VLHPSIYHTKGLIEYLVRVWKKPPLVYCDYHGHSRKKNVFFYGCAGAE 381
V P HT L EY+ W + P + + G+++ +V+ GC AE
Sbjct: 176 VTDPQTDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAE 223
>U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinase
protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 238 VLHPSIYHTKGLIEYLVRVWKKPPLVYCDYHGHSRKKNVFFYGCAGAE 381
V P HT L EY+ W + P + + G+++ +V+ GC AE
Sbjct: 244 VTDPQTDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVWSVGCILAE 291
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 601 PFKGFHLNTQHLQNVGSDFCEALNGLNDSAANVDIQLTKD 720
P K LNT L V SDF E ++ ++ AA V + KD
Sbjct: 469 PSKFLELNTNDLTQVSSDFVEKMDQFDEEAAQVINEAFKD 508
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -1
Query: 578 EASIV*ERVTPRCLHTVTRAVLSLSLSTRKEHE--PSAKAGDILCIKAGN 435
EA IV +R TP C+ + L S ++ +E PSAK G+ +CIK N
Sbjct: 969 EAGIV-KRGTPICVPSKEGIFLGTISSVQRNNEEVPSAKQGEEVCIKIEN 1017
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = -1
Query: 578 EASIV*ERVTPRCLHTVTRAVLSLSLSTRKEHE--PSAKAGDILCIKAGN 435
EA IV +R TP C+ + L S ++ +E PSAK G+ +CIK N
Sbjct: 1068 EAGIV-KRGTPICVPSKEGIFLGTISSVQRNNEEVPSAKQGEEVCIKIEN 1116
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 331 GHSRKKNVFFYGCAGAESWCSSDRL--VQDE 417
G S K + F Y C AE+W S L +QDE
Sbjct: 1579 GESEKAHQFLYDCGEAEAWMSEQELYMMQDE 1609
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 331 GHSRKKNVFFYGCAGAESWCSSDRL--VQDE 417
G S K + F Y C AE+W S L +QDE
Sbjct: 1579 GESEKAHQFLYDCGEAEAWMSEQELYMMQDE 1609
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -1
Query: 803 SKSSXESVFRTLSEPEPSSLSTAASPFRSFVS*MSTLAALSFNPLRASQKSLPT-FCRCW 627
S + S +++S+P+ ++ STA+S VS +S++A+L + +K T +
Sbjct: 734 SSTPSSSTQQSISKPKATASSTASSAILQVVSKLSSVASLDKSAAAVDKKPTKTVLSQGT 793
Query: 626 VFRWK 612
+RWK
Sbjct: 794 PYRWK 798
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 331 GHSRKKNVFFYGCAGAESWCSSDRL--VQDE 417
G S K + F Y C AE+W S L +QDE
Sbjct: 1579 GESEKAHQFLYDCGEAEAWMSEQELYMMQDE 1609
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 331 GHSRKKNVFFYGCAGAESWCSSDRL--VQDE 417
G S K + F Y C AE+W S L +QDE
Sbjct: 1579 GESEKAHQFLYDCGEAEAWMSEQELYMMQDE 1609
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +1
Query: 331 GHSRKKNVFFYGCAGAESWCSSDRL--VQDE 417
G S K + F Y C AE+W S L +QDE
Sbjct: 1579 GESEKAHQFLYDCGEAEAWMSEQELYMMQDE 1609
>U50300-8|AAC48105.1| 646|Caenorhabditis elegans Hypothetical
protein R03H4.6 protein.
Length = 646
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +1
Query: 493 RVERERESTARVTVWRHLGVTRSYTMEASFCGFDRGPFKGFHLNTQHLQNVGSDFCE 663
R ++R S + + ++ + + FDRG + NT HL VG + CE
Sbjct: 576 RYVKKRFSMVKCKKCQFYDLSHVFVENDKYLTFDRGSMLSYVDNTIHLTKVGVELCE 632
>U40941-9|AAX55692.1| 294|Caenorhabditis elegans Hypothetical
protein F35C8.1 protein.
Length = 294
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +3
Query: 426 IPHVASLDAQNITCFCTRFVFFPCRKRKGEYRSGNGMETPWCYALLHNGSLFLR 587
IP V A C R + P G R GNG Y L++NG L R
Sbjct: 23 IPEVLKNGALGYICVSGRILSVPENLLYGGERIGNGEGQSAVYRLIYNGKLIAR 76
>Z92797-4|CAB07238.3| 478|Caenorhabditis elegans Hypothetical
protein H25P06.2b protein.
Length = 478
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 283 LVRVWKKPPLVYCDYHGHSRKKNVFFYGCAGAESWCSSDRLVQDEPVKYLML 438
+V +W +PP + + K +V+ GC AE W + D K L L
Sbjct: 259 VVTLWYRPPELLLGDRQYGTKIDVWGAGCIMAEMWTRQPIMQGDTEQKQLQL 310
>Z92797-3|CAB07237.2| 445|Caenorhabditis elegans Hypothetical
protein H25P06.2a protein.
Length = 445
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 283 LVRVWKKPPLVYCDYHGHSRKKNVFFYGCAGAESWCSSDRLVQDEPVKYLML 438
+V +W +PP + + K +V+ GC AE W + D K L L
Sbjct: 259 VVTLWYRPPELLLGDRQYGTKIDVWGAGCIMAEMWTRQPIMQGDTEQKQLQL 310
>Z83118-3|CAB05577.3| 478|Caenorhabditis elegans Hypothetical
protein H25P06.2b protein.
Length = 478
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 283 LVRVWKKPPLVYCDYHGHSRKKNVFFYGCAGAESWCSSDRLVQDEPVKYLML 438
+V +W +PP + + K +V+ GC AE W + D K L L
Sbjct: 259 VVTLWYRPPELLLGDRQYGTKIDVWGAGCIMAEMWTRQPIMQGDTEQKQLQL 310
>Z83118-2|CAB05576.2| 445|Caenorhabditis elegans Hypothetical
protein H25P06.2a protein.
Length = 445
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 283 LVRVWKKPPLVYCDYHGHSRKKNVFFYGCAGAESWCSSDRLVQDEPVKYLML 438
+V +W +PP + + K +V+ GC AE W + D K L L
Sbjct: 259 VVTLWYRPPELLLGDRQYGTKIDVWGAGCIMAEMWTRQPIMQGDTEQKQLQL 310
>AF099917-2|AAC68785.1| 235|Caenorhabditis elegans Hypothetical
protein F54D10.5 protein.
Length = 235
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = -3
Query: 726 IQVFR*LNVDISSAVVQSIKSFTKVAADILQVLGVQVETLKRSTIETAERGFHCVRARN- 550
++ F LN++ + + I K+ IL +L + +R I+ HC ARN
Sbjct: 138 LKAFLELNMENFAEKLTPIFHDLKLDNRILHILKTAEQCCRREDIDKRFIPEHCTIARNF 197
Query: 549 TKVSPYRYPSGTLPFSFYTERTRTECKS 466
K + Y P T F F + T C S
Sbjct: 198 LKATFYTGPKRTDNFIFQSNLFSTSCGS 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,062,921
Number of Sequences: 27780
Number of extensions: 394367
Number of successful extensions: 887
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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