Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_A20
         (806 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    27   0.15 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   3.3  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +1

Query: 172 YKSHRCGLTNEDLNRRWCKPSPVLHPSIYHTKGLIEYLVRVWKKPPLVYCDYHGHS 339
           Y S    L++ED  + W   + V      H  G + Y    W+ P +V  DY  +S
Sbjct: 246 YSSDSAVLSDEDQTKGWDGSNMVEGNESDHNDGRLRY----WRTPSVVVSDYSDYS 297


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
 Frame = +3

Query: 501 KRKGEYRSGNGMETPWCY-----ALLHNGSLFLRFRSWTF*GFP 617
           K+K E  +G  + TPW Y      L+   S  L   SWT   FP
Sbjct: 157 KKKLEEWTGKNITTPWDYYYIYHTLVAEQSYGLTLPSWTNNIFP 200


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
 Frame = +3

Query: 501 KRKGEYRSGNGMETPWCY-----ALLHNGSLFLRFRSWTF*GFP 617
           K+K E  +G  + TPW Y      L+   S  L   SWT   FP
Sbjct: 172 KKKLEEWTGKNITTPWDYYYIYHTLVAEQSYGLTLPSWTNNIFP 215


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
 Frame = +3

Query: 501 KRKGEYRSGNGMETPWCY-----ALLHNGSLFLRFRSWTF*GFP 617
           K+K E  +G  + TPW Y      L+   S  L   SWT   FP
Sbjct: 60  KKKLEEWTGKNITTPWDYYYIYHTLVAEQSYGLTLPSWTNNIFP 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,229
Number of Sequences: 438
Number of extensions: 4746
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)