Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_A19
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    24   0.93 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    24   0.93 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.6  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.7  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 174 ILERTLNLRRQNNITCCNVIIDKIIEYLFTCVQSFYNNXK 55
           +L  T+ L      TC  +I  K I  L TC+    NN K
Sbjct: 227 LLSETVALFNDVFGTCLILITGKSIVQLLTCLNFITNNLK 266


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 174 ILERTLNLRRQNNITCCNVIIDKIIEYLFTCVQSFYNNXK 55
           +L  T+ L      TC  +I  K I  L TC+    NN K
Sbjct: 227 LLSETVALFNDVFGTCLILITGKSIVQLLTCLNFITNNLK 266


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 79  YTCK*ILNNFINNYIATCNIILS 147
           +T K  +NN  NN + TC I L+
Sbjct: 482 FTYKITVNNSGNNRMGTCRIFLA 504


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 269 IIIMCRKLVHSKVNSIFILKKNKVIIF 349
           II++C K+    +   F  +KN  +++
Sbjct: 260 IILLCEKVAKEDIQVRFFEEKNGKVVW 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,846
Number of Sequences: 336
Number of extensions: 2007
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)