Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_A18
         (614 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5F8A Cluster: PREDICTED: hypothetical protein;...    48   2e-04
UniRef50_Q9YDR5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.4  

>UniRef50_UPI00015B5F8A Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 92

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = +1

Query: 226 EKQLTLQRKETNPVMFTRLVVMRLVYGLAKVMGFEEPVSEVM 351
           ++QL+ Q KET    F RLVVMRL++GLA  MG+ E +S V+
Sbjct: 29  QRQLSPQAKETTAADFIRLVVMRLIFGLASAMGYGEGLSNVL 70


>UniRef50_Q9YDR5 Cluster: Putative uncharacterized protein; n=1;
           Aeropyrum pernix|Rep: Putative uncharacterized protein -
           Aeropyrum pernix
          Length = 424

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
 Frame = -1

Query: 140 AILFSNSRQIVYVTDAFTDEYLRVNLTHY----RVVKTEETMLTEW 15
           A+L +++ +I  V DA+TD+YL V+LT Y    RV+     +L E+
Sbjct: 253 AVLEASAPRIWVVRDAYTDQYLHVSLTPYGSRLRVLDASGEVLAEY 298


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,801,626
Number of Sequences: 1657284
Number of extensions: 7391282
Number of successful extensions: 12271
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12271
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)