Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_A14
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 187 8e-48
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 184 9e-47
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 183 2e-46
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 144 7e-35
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 143 1e-34
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 140 9e-34
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 140 9e-34
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 140 9e-34
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 97 2e-20
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 97 2e-20
AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical ... 29 3.1
AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical... 29 5.5
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 29 5.5
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 28 9.6
Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical pr... 28 9.6
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 28 9.6
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 28 9.6
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 187 bits (456), Expect = 8e-48
Identities = 83/174 (47%), Positives = 120/174 (68%), Gaps = 3/174 (1%)
Frame = +1
Query: 157 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 336
LQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+ L G DY +FK+GI
Sbjct: 34 LQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGI 93
Query: 337 RPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 513
+PMWED N GGRWL+ ++K++R LD +WL++++ ++GE F E D ICGAVVNVR
Sbjct: 94 KPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQ 153
Query: 514 KVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATK 669
K DK+++WT DA + + IG+ LK++L I + ++VH+D+ + SS K
Sbjct: 154 KGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSSTVK 207
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 184 bits (447), Expect = 9e-47
Identities = 85/176 (48%), Positives = 121/176 (68%), Gaps = 5/176 (2%)
Frame = +1
Query: 157 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 336
LQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+ L G DY +FK+GI
Sbjct: 34 LQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGI 93
Query: 337 RPMWEDDANKMGGRWLISLEKK-QRFTD-LDRFWLDVVLLLIGENF-ENSDEICGAVVNV 507
+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE F E D ICGAVVNV
Sbjct: 94 KPMWEDVNNVQGGRWLVVVDKQLQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNV 153
Query: 508 RPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATK 669
R K DK+++WT DA + + IG+ LK++L I + ++VH+D+ + SS K
Sbjct: 154 RQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSSTVK 209
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 183 bits (445), Expect = 2e-46
Identities = 85/177 (48%), Positives = 121/177 (68%), Gaps = 6/177 (3%)
Frame = +1
Query: 157 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 336
LQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+ L G DY +FK+GI
Sbjct: 34 LQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGI 93
Query: 337 RPMWEDDANKMGGRWLISLEKK--QRFTD-LDRFWLDVVLLLIGENF-ENSDEICGAVVN 504
+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE F E D ICGAVVN
Sbjct: 94 KPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVN 153
Query: 505 VRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATK 669
VR K DK+++WT DA + + IG+ LK++L I + ++VH+D+ + SS K
Sbjct: 154 VRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSSTVK 210
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 144 bits (349), Expect = 7e-35
Identities = 63/150 (42%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
Frame = +1
Query: 154 RLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQG 333
+L+ W+ W+ +++RNK+WEE L + TF +V +FW L+ IK PS L DY VF+ G
Sbjct: 18 KLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDYNVFRDG 77
Query: 334 IRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVR 510
I PMWE N+ GGRWLI++EK + +D W ++++ +IGE F ++ + +CG V NVR
Sbjct: 78 IEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCGIVCNVR 137
Query: 511 PKVDKIAIWTADAMKQHATIEIGKKLKEQL 600
K KI++WT ++ A + IG LK+ L
Sbjct: 138 GKGSKISVWTTNSADDGANLRIGGVLKQVL 167
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 143 bits (347), Expect = 1e-34
Identities = 64/149 (42%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Frame = +1
Query: 157 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 336
L+ W+ W+ +++RNK+WE+ L ++ TF+TV +FW LY I+ PS L DY VF+ I
Sbjct: 14 LKRNWTWWYLNDERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRDDI 73
Query: 337 RPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 513
+PMWE N GGRWLI ++K + +D WL++++ L+GE F ++ + ICG V NVR
Sbjct: 74 QPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNVRG 133
Query: 514 KVDKIAIWTADAMKQHATIEIGKKLKEQL 600
K KI++WT D + IG LKE+L
Sbjct: 134 KGSKISVWTKDCNDDETNMRIGVVLKEKL 162
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 140 bits (340), Expect = 9e-34
Identities = 75/187 (40%), Positives = 107/187 (57%), Gaps = 11/187 (5%)
Frame = +1
Query: 157 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 336
LQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+ I
Sbjct: 11 LQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDI 70
Query: 337 RPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 513
+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NVR
Sbjct: 71 QPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRG 130
Query: 514 KVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHSSA 663
+ KI++WT + + IG LKE+L H K I +Q HR+ + K +SA
Sbjct: 131 QGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSA 190
Query: 664 TKNLYTV 684
K +++
Sbjct: 191 LKYKFSL 197
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 140 bits (340), Expect = 9e-34
Identities = 75/187 (40%), Positives = 107/187 (57%), Gaps = 11/187 (5%)
Frame = +1
Query: 157 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 336
LQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+ I
Sbjct: 50 LQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDI 109
Query: 337 RPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 513
+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NVR
Sbjct: 110 QPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRG 169
Query: 514 KVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHSSA 663
+ KI++WT + + IG LKE+L H K I +Q HR+ + K +SA
Sbjct: 170 QGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSA 229
Query: 664 TKNLYTV 684
K +++
Sbjct: 230 LKYKFSL 236
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 140 bits (340), Expect = 9e-34
Identities = 75/187 (40%), Positives = 107/187 (57%), Gaps = 11/187 (5%)
Frame = +1
Query: 157 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 336
LQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+ I
Sbjct: 11 LQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDI 70
Query: 337 RPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 513
+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NVR
Sbjct: 71 QPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRG 130
Query: 514 KVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHSSA 663
+ KI++WT + + IG LKE+L H K I +Q HR+ + K +SA
Sbjct: 131 QGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSA 190
Query: 664 TKNLYTV 684
K +++
Sbjct: 191 LKYKFSL 197
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Frame = +1
Query: 244 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 423
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 424 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 597
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 598 LGIHGKIGFQVHRDTMVKHSS---ATKNL 675
L + + ++ H D + SS TKN+
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSSYRHTTKNI 210
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Frame = +1
Query: 244 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 423
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 424 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 597
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 598 LGIHGKIGFQVHRDTMVKHSS---ATKNL 675
L + + ++ H D + SS TKN+
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSSYRHTTKNI 210
>AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical
protein Y105E8A.5 protein.
Length = 576
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 706 KICNAKTKQCIDSWSQNYA*PLCLCVLGNQSCRVSLAVLSVFS 578
KI N+ T CI +++ A PL + V+G + C + L F+
Sbjct: 180 KIANSATITCIAKLTKSTAEPLDILVIGTEHCEIFLIDSQAFT 222
>AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical
protein C17H12.8 protein.
Length = 348
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 509 LTLTTAPQISSEFSKFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSHIG 339
LT T S++F F TT Q ++KSV R++ H +L + +H+G
Sbjct: 84 LTRTIVSSRSAKFVHFYIFPNTTTKFQVITKSVNMHSSFRIVVHFERMLNTTVTHLG 140
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/93 (27%), Positives = 40/93 (43%)
Frame = +1
Query: 385 ISLEKKQRFTDLDRFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHA 564
I+ K RF++ W DV + +F+ D I K+ I T+ ++ H
Sbjct: 736 ITNPKASRFSESSLSWKDVKMSKTVLSFDVFDRI--------EKIVPFHILTS--IETHI 785
Query: 565 TIEIGKKLKEQLGIHGKIGFQVHRDTMVKHSSA 663
T+E+ K L E + KIG + V H SA
Sbjct: 786 TVELEKMLIEYISNARKIGVSFNLQNSVTHESA 818
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 151 TRLQN-QWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHD-YAVF 324
TR N QW +R + L F + + H++ P+++R+ + Y V
Sbjct: 687 TRAINIQWPTLVDQRNRKREHVAVLHAKMWFGRTDQLTKWKEHVQ-PADIRRFMEMYEVQ 745
Query: 325 KQGIRPMWEDDANKMGGRW 381
+G+ W+D+A+ G+W
Sbjct: 746 TKGLALKWKDEADIYDGKW 764
>Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical
protein W01A8.7 protein.
Length = 266
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 298 RQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVV 444
+ GH Y K+ + WE + N G+W+ K++ +D+FW++V+
Sbjct: 227 KAGH-YQHLKKILYKKWESENN---GKWI-----KRKSNQVDKFWIEVI 266
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 151 TRLQN-QWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHD-YAVF 324
TR N QW +R + L F + + H++ P+++R+ + Y V
Sbjct: 687 TRAINIQWPTLVDQRNRKREHVAVLHAKMWFGRTDQLTKWKEHVQ-PADIRRFMEMYEVQ 745
Query: 325 KQGIRPMWEDDANKMGGRW 381
+G+ W+D+A+ G+W
Sbjct: 746 TKGLALKWKDEADIYDGKW 764
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = -2
Query: 488 QISSEFSKFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSH 345
++ E K +KR + K C F + +S +L++SS H
Sbjct: 1345 RLEVEVKKNKGVKRSVVKKELTFADYKNCLFDKTVSRKQQMLISSSKH 1392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,511,992
Number of Sequences: 27780
Number of extensions: 380353
Number of successful extensions: 933
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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