Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_A13
         (826 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.9  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   5.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.0  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 289 KQSIHDKFGFLFLHLVR*CFSTLGF 215
           K+  +  FG +F+ L+  CFS L +
Sbjct: 142 KKIRYSAFGMIFVALLEHCFSMLNY 166


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +1

Query: 34  NSLQKYXXVIHKTTYTSENQILIILXFKVIHFAFXTNSPNSHV 162
           NSL KY   +H     +E + +I   F    F   T   N  V
Sbjct: 147 NSLHKYKPTVHLVRVGTEPRRVISFPFPETQFIAVTAYQNEEV 189


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 552 HKTNPKDIDQAWE 590
           HKTN  D+ Q WE
Sbjct: 235 HKTNVMDVMQWWE 247


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 747 SYFLYFAHHFLYSVHHFLYS 688
           +Y+ Y+A   L  V++F Y+
Sbjct: 100 TYYFYYAFIILLCVYYFYYA 119



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 741 FLYFAHHFLYSVHHFLYS 688
           F+ F  HFL   ++F Y+
Sbjct: 89  FIIFTVHFLLCTYYFYYA 106


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 421 NISTQAFCFFSPFFSLAVKPFPEY 350
           N++ Q    + PF+    +P+P Y
Sbjct: 243 NLTCQPAVPYVPFYRYCYRPYPVY 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,857
Number of Sequences: 336
Number of extensions: 3542
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)