Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_A13
(826 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-8|CAA86746.1| 253|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 31 0.76
Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical p... 29 3.1
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical pr... 29 5.3
U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical pr... 28 9.3
>Z46787-8|CAA86746.1| 253|Caenorhabditis elegans Hypothetical
protein C16C10.8 protein.
Length = 253
Score = 116 bits (279), Expect = 2e-26
Identities = 55/145 (37%), Positives = 92/145 (63%), Gaps = 1/145 (0%)
Frame = +3
Query: 174 MVVFTCSHCGESVQXPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDYESHIKCITEEERY 353
MV F+C++CGE+ + +VE+H L +CRN SC+DC + + Y+ H+KCITE ++Y
Sbjct: 1 MVFFSCNNCGEACKKNQVERH-LFQCRNTT--FSCIDCQLVYTRETYKDHVKCITENQKY 57
Query: 354 SGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINF 533
GK + KE KGE KQNAWV+ + ++ + V+ ++++++ N PRK+ KFINF
Sbjct: 58 GGKNYVEKENKGEAKQNAWVDQVNRAIEFVTDS--QVKELLKSVAGFANIPRKEAKFINF 115
Query: 534 VKNVCGHKTNPKDID-QAWEFISVK 605
+ N C + K++ +AW+ I+ +
Sbjct: 116 LTNSC--RLRDKNLALRAWQAIAAE 138
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +3
Query: 291 KDFLGKDYESHIKCITEEERYSGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRR 470
K+ K E H+ + E ++ K T K+++ EK + + Q+ D+QK + ++
Sbjct: 150 KEEKNKQREKHLATHKKAEEFARKVRTDKDEQREKHLDTHKKAEQNAQDDQKYHDEARKK 209
Query: 471 IIETISKHNNTPRKK 515
IET K K+
Sbjct: 210 YIETQKKAEENEEKR 224
>Z66496-6|CAA91281.3| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 120 YTFCIXNK*PQFTRVLQEMVVFTCSHCGE-SVQXPKVEKHYLTKCRNKNPNLSCMDCFKD 296
YTF N ++T +LQ+ TC CG S P T+C N N C + D
Sbjct: 115 YTFLCSNA--KYTPLLQQFCAKTCGFCGSGSTAAPVACVDTSTQCAYWNKNGFCSSIYYD 172
>Z48585-12|CAI46589.1| 191|Caenorhabditis elegans Hypothetical
protein E04D5.4 protein.
Length = 191
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 120 YTFCIXNK*PQFTRVLQEMVVFTCSHCGE-SVQXPKVEKHYLTKCRNKNPNLSCMDCFKD 296
YTF N ++T +LQ+ TC CG S P T+C N N C + D
Sbjct: 115 YTFLCSNA--KYTPLLQQFCAKTCGFCGSGSTAAPVACVDTSTQCAYWNKNGFCSSIYYD 172
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 192 SHCGESVQXPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDYESH 323
S+ G+ V+ ++ K + +C N N +L C+ C + G++ H
Sbjct: 37 SNRGKVVKNQEIIKTFCDECDNCNKSLMCLTCGRILCGRNDSGH 80
>Z81500-9|CAB04098.2| 141|Caenorhabditis elegans Hypothetical
protein F11D11.6 protein.
Length = 141
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 215 LNRLPTMTACKNNHFL*NTCELGLFVXNAKCI 120
L T+ CKN F+ N C L LFV + KCI
Sbjct: 43 LTAFKTVGECKNGCFVKNDCFLALFVID-KCI 73
>U28735-5|AAF99955.3| 279|Caenorhabditis elegans Hypothetical
protein F48E3.4 protein.
Length = 279
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +1
Query: 187 HAVIVGSLFRXPKWKSIISLNVGIKIQICHVWTVSKIF*EKIMNRISSALLKKKDT 354
H +V L + K K+I S G + V T SK F + N I+ A++KKKD+
Sbjct: 28 HQYLVKVLTKDTKLKNI-STCTGTLLSPSVVLTSSKCFPDTRKNLIAQAIIKKKDS 82
>Z81037-6|CAB02748.2| 414|Caenorhabditis elegans Hypothetical
protein C17E4.10 protein.
Length = 414
Score = 27.9 bits (59), Expect = 9.3
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Frame = +3
Query: 201 GESVQXPKVEKHYLTKCRNKN-PNLSCMDCFKDFLGKDYESHIKCITEEERYSGKGFTAK 377
G + P+ E+ L K+ P LS F DF + E EE+ + T +
Sbjct: 80 GAPIATPEDEEQLLDDLEIKSAPLLSPRRTFADFEDRSSEEKENRRIEEDDDTEADTTIR 139
Query: 378 EKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINFVKN 542
E+ +K+ + VL E+K + +ET+ +H + P FI V++
Sbjct: 140 EEFDYEKE-------EEVLKEEKIID---KPNVETVEEHKENKNESPDFIRMVES 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,187,462
Number of Sequences: 27780
Number of extensions: 329290
Number of successful extensions: 1114
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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