Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_A12
(823 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 321 1e-86
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 291 1e-77
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 250 4e-65
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 220 4e-56
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 210 4e-53
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 145 1e-33
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 95 2e-18
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 94 4e-18
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 92 1e-17
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 92 2e-17
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 89 2e-16
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 87 7e-16
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 85 2e-15
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 82 1e-14
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 80 8e-14
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 79 1e-13
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 75 3e-12
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 74 5e-12
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 74 5e-12
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 66 8e-10
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 63 9e-09
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 62 2e-08
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 61 3e-08
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 58 4e-07
UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN full-le... 40 0.075
UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2; Clost... 36 1.6
UniRef50_A5GTH3 Cluster: Possible biopolymer transport protein; ... 35 2.1
UniRef50_Q69NC6 Cluster: Putative uncharacterized protein OJ1742... 35 2.1
UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1; ... 34 4.9
UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to ENSANGP000... 33 6.5
UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsi... 33 8.6
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 321 bits (789), Expect = 1e-86
Identities = 140/203 (68%), Positives = 168/203 (82%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR GS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPG
Sbjct: 5 KFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW+
Sbjct: 65 SKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+MEIQ
Sbjct: 125 SKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQ 184
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
+NGGT+ +K+ WARE LE+ +PV
Sbjct: 185 VNGGTVAEKLDWARERLEQQVPV 207
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
+ VF Q EMID I SRWHT LPRKTH+GL K +C+
Sbjct: 208 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACI 254
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 291 bits (714), Expect = 1e-77
Identities = 129/203 (63%), Positives = 158/203 (77%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR G +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE RPG
Sbjct: 5 KFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK+W+
Sbjct: 65 LKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
W+D G+K ++KDF M +YC V+RVI HTQMKLL RQKKAHIMEIQ
Sbjct: 125 SKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQ 184
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
LNGGT+ +KV WA+ LEK +PV
Sbjct: 185 LNGGTVAEKVAWAQARLEKQVPV 207
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 655 SVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCLHWTLASXLGC 819
SVF+Q E+ID I SRWHT LPRKTHKGL K +C+ + +GC
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGC 264
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 250 bits (611), Expect = 4e-65
Identities = 109/164 (66%), Positives = 129/164 (78%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR G MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 5 KFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 65 SKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 533
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 125 SKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 658 VFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
V A +MID I SRWHT LPRKTHKGL K +C+
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 220 bits (537), Expect = 4e-56
Identities = 102/206 (49%), Positives = 139/206 (67%), Gaps = 3/206 (1%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K PR G +GF P+KRSR+ RG+ ++FPKDDPS+ HLT+F+ YKAGMTH+VR+ DRPG
Sbjct: 56 KFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDVDRPG 115
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SK+NKKE+VE VTI+E PPMV VG+VGY +TP G + + TVWA H S + RRRFYKNW
Sbjct: 116 SKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYKNWKQ 175
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQ---KKAHIM 572
+ GR + + K + ++RV+AHTQ++ L+ + KKAH+
Sbjct: 176 SAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKKAHVS 235
Query: 573 EIQLNGGTIEDKVKWAREHLEKPIPV 650
EIQ+NGGTI K++ A+ LEK + +
Sbjct: 236 EIQINGGTIAQKIELAKSLLEKEVRI 261
Score = 37.5 bits (83), Expect = 0.40
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
DSVF Q E D RW LPRKTH+GL K +C+
Sbjct: 262 DSVFQQSEACDVCAVTKGHGFTGVVKRWGVACLPRKTHRGLRKVACI 308
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 210 bits (512), Expect = 4e-53
Identities = 97/181 (53%), Positives = 127/181 (70%)
Frame = +3
Query: 48 SAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSK 227
SAPR GS+GF P+K S H GKVK FPKDD SKPVHLT F+ +KA MTH++++ DRP SK
Sbjct: 7 SAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKVDRPESK 66
Query: 228 INKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXX 407
+NKKE+VE V I+ETPPMV +G+VGYIE P GL V+AEH+S ++ FYKNW+
Sbjct: 67 MNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYKNWHSEK 126
Query: 408 XXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLN 587
++G++ +E +FK M +YC V+ ++AHTQM LL QKKAH+MEIQ+
Sbjct: 127 KASTKYF------DMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLSLHQKKAHLMEIQVM 180
Query: 588 G 590
G
Sbjct: 181 G 181
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 145 bits (351), Expect = 1e-33
Identities = 83/188 (44%), Positives = 112/188 (59%)
Frame = +3
Query: 87 KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTII 266
K S +H+GKV FPKD SKPV+L+AF+GY+AGMTHVVR+ DRPGSK++KKE+VE VTI+
Sbjct: 1 KCSSQHQGKVTGFPKDGSSKPVYLSAFLGYQAGMTHVVRKVDRPGSKVHKKEVVEVVTIV 60
Query: 267 ETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQD 446
ET P + VG VG ET GL+ +V+A+H+S +C+R K Y W+
Sbjct: 61 ETMPFMTVGTVGCTETIWGLQTFKSVFAKHISNECKRTGIK--YKTNTSPNTKARSSWR- 117
Query: 447 ELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARE 626
G ++ TQM LL QKKAH+ E Q+N G + K+ WA +
Sbjct: 118 --GTSAL-------------------TQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHK 155
Query: 627 HLEKPIPV 650
LE+ +PV
Sbjct: 156 KLEQQVPV 163
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 95.1 bits (226), Expect = 2e-18
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Frame = +3
Query: 54 PRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 233
P+ GSMGF P+KR+ R G++ ++P+ + S+ + + F G+KAGMTHV+ P S
Sbjct: 7 PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65
Query: 234 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMS--EDCRRRFYKNWYXXX 407
+EI +AVT++E PPM + V GY TP+G++ +WA+ S + RF
Sbjct: 66 GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125
Query: 408 XXXXXX--XXXXWQDELGRKSIEKDFKKMIRYCSV--VRVIAHTQMKLLKQRQKKAH-IM 572
+ + + D + ++ VR+I TQ L+K K IM
Sbjct: 126 DIEEGRKPAKRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPVIM 185
Query: 573 EIQLNGGTIEDKVKWAREHL 632
E+ L GG K++WA E L
Sbjct: 186 EVGLVGGDTGAKLEWAHERL 205
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 93.9 bits (223), Expect = 4e-18
Identities = 55/115 (47%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K APR GS+GF P+KR+ R +VK +P+ D KPV L AF+GY+AGMTHV DRPG
Sbjct: 5 KKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVDDRPG 63
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPH-GLRALLTVWAEHMSE-DCRRR 380
+ KEI VTI+ETPPM V Y P+ G +L WA+ E + +RR
Sbjct: 64 RPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRR 118
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 92.3 bits (219), Expect = 1e-17
Identities = 65/200 (32%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Frame = +3
Query: 54 PRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 233
P+ GSMGF P+KR+ R G+VK++P+ D S V + F G+KAGMTHV+ PGS
Sbjct: 7 PKKGSMGFGPRKRANRPYGRVKSWPETD-SDEVRVQGFAGWKAGMTHVMMRDLNPGSPSA 65
Query: 234 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 413
E+ +AVT++E PPM + V GY TP+G + WA S D +
Sbjct: 66 GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWA---SADKLSDVIPSLPRRIPE 122
Query: 414 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM-KLLKQRQKKAHIMEIQLNG 590
D+L + + VR+I +Q K+ K IME+ L G
Sbjct: 123 RKEHDANAHLDKLRESDLAE-----------VRLIVSSQPDKVSAVGSKSPEIMEMGLTG 171
Query: 591 GTIEDKVKWAREHLEKPIPV 650
G + ++ WA E L + + +
Sbjct: 172 GDLGAQLDWAAEKLGEELGI 191
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 91.9 bits (218), Expect = 2e-17
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 2/201 (0%)
Frame = +3
Query: 54 PRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 233
PR GS+ F P+KR++R +++++P++D V L AF YKAGM+H + D P S
Sbjct: 8 PRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKSPNA 64
Query: 234 KKEIVEAVTIIETPPM-VC-VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXX 407
+E+ +TI+E PP+ VC + V G E + L L VWA+++ ++ R+
Sbjct: 65 GQEVFTPITILEAPPINVCAIRVYGRNERNY-LTTLTEVWADNLDKELERKI-------- 115
Query: 408 XXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLN 587
+ RK++E D + + VRV+ HT KL +KK I+EI++
Sbjct: 116 ---------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIG 165
Query: 588 GGTIEDKVKWAREHLEKPIPV 650
G IE+++ +A+E L K + +
Sbjct: 166 GKDIEERLNYAKEILGKQLNI 186
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 88.6 bits (210), Expect = 2e-16
Identities = 66/195 (33%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Frame = +3
Query: 54 PRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 233
PR GSMGF P+KR+ + ++P DD V L F GYKAGMTHVV D+ +
Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64
Query: 234 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 413
E VT++ETPPM V Y +TP+G + L VWA+ E R
Sbjct: 65 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR-----------T 113
Query: 414 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHT-QMKLLKQRQKKAHIMEIQLNG 590
DEL IE + I + +RVI HT +K +ME ++ G
Sbjct: 114 LSVPDEGGDTDEL----IEALDTEEI---ADIRVITHTVPGDTAGVPKKNPDVMETRVGG 166
Query: 591 GTIEDKVKWAREHLE 635
GT+ D++++A + +E
Sbjct: 167 GTLADRLEFAADLIE 181
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 86.6 bits (205), Expect = 7e-16
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K PR GS+GF P+KR++ +++++PK+ V + F GYKAGMTH++ D PG
Sbjct: 3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED---CRRRFYK- 389
N KEI VTIIETPP+ G+ Y GL V D + R K
Sbjct: 60 -LTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKP 118
Query: 390 ----NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSV--VRVIAHTQMKLLKQR 551
+Y + E+ + + + + MI+ + VR I TQ ++K +
Sbjct: 119 KPKMTFYKLLERRIATLPKNYTQEMFEQKLGQ-LEDMIKEGEIVDVRAIVATQPWVIKLK 177
Query: 552 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPV 650
KK +ME + G ++E+K + +E L K + V
Sbjct: 178 -KKPEVMEYAIGGTSVEEKFNYIKEKLGKELRV 209
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 85.0 bits (201), Expect = 2e-15
Identities = 59/197 (29%), Positives = 92/197 (46%)
Frame = +3
Query: 54 PRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 233
PR GS+ F P+KR+ R +++++P ++ V + F GYKAGMTH + D P S
Sbjct: 12 PRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTE 68
Query: 234 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 413
+EI VTI++ PPM + Y TP G R + WAE E R +
Sbjct: 69 GEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVF-----TVPK 123
Query: 414 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 593
+EL + I ++ +RVI TQ K +KK +ME ++ G
Sbjct: 124 DGEAGDLDKIEELVDEGIVEE----------IRVIVATQPKKAGVPKKKPDVMEYRIGGK 173
Query: 594 TIEDKVKWAREHLEKPI 644
+ ++ ++A E L + I
Sbjct: 174 DVRERFEYAVEILSEEI 190
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 82.2 bits (194), Expect = 1e-14
Identities = 62/203 (30%), Positives = 95/203 (46%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K PR GS +YP+KR+R +V+ +P++ F GYK GM HV+
Sbjct: 3 KGHRPRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKN 58
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
S +E A T+IE PP+ V V Y +TP+G + L VWA+ + +D R F
Sbjct: 59 SPFYGQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF------ 112
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
+D+ + K +++ S VRV+A TQ +L +KK ++EI
Sbjct: 113 ----------PLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPELIEIA 162
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
+ GG E + A E L K + +
Sbjct: 163 V-GGPPEKALSLALEKLGKDLTI 184
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 79.8 bits (188), Expect = 8e-14
Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K APR GS G P+KR+ +V+++P D KP+ AF+GYK GMTHV+ DR
Sbjct: 5 KKEAPRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMIDDREH 61
Query: 222 SKINKKEIVEAVTIIETPPMVCVG--VVGYIETPHGLRALLTVW 347
+EI VT+IETPPMV +G V GY + G AL VW
Sbjct: 62 VDTAGQEIFVPVTVIETPPMVVLGARVYGY-DPNRGRYALTEVW 104
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 79.0 bits (186), Expect = 1e-13
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 5/209 (2%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K ++PR GS G P+KRS + +P+ + P L F+GYK GMTHV D P
Sbjct: 5 KLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMIDDWPN 63
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLT-VWAEHMSE--DCRRRFYK- 389
S N KEI VT++E PP++ + + Y G ++T W+ + D RR +
Sbjct: 64 SPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRRIHSI 123
Query: 390 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKA-H 566
+ + + +L I+ + +++ + R++ TQ + + KKA
Sbjct: 124 SSFLKDDESKKKFDERFNTKL--DLIKSNLDRIVYF----RLLVSTQPRKIPSLGKKAPD 177
Query: 567 IMEIQLNGGTIEDKVKWAREHLEKPIPVR 653
++EIQ+ GG + ++ +A L K I +R
Sbjct: 178 LVEIQIGGGEKKSQLDYALNILGKEITIR 206
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 74.5 bits (175), Expect = 3e-12
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 1/204 (0%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K +PR GS+ + P+ R++ +++A+PK D +P + A G+KAG +V DR
Sbjct: 5 KRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSIDDREK 63
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF-YKNWY 398
K++V T++ TPP++ +G+ GY + GL A V+AE + + + KN
Sbjct: 64 VPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSIAKEISLKN-- 121
Query: 399 XXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEI 578
+ E + EK KK+ ++V I+ + L QKK +I E
Sbjct: 122 --------------KQENALDNAEKSLKKIKEIFAIV-AISPSAAGL---EQKKPYIFEA 163
Query: 579 QLNGGTIEDKVKWAREHLEKPIPV 650
++GG I + +E L K I +
Sbjct: 164 SVSGGDIPKQFAHVKELLGKEIKI 187
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 73.7 bits (173), Expect = 5e-12
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Frame = +3
Query: 51 APRXGSMGFYPKKRSRRHRGKVKAFPK--DDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 224
APR GS+G+ P+ R+R + K++ + + D P + F+G+KAGM+H+V DRP S
Sbjct: 6 APRRGSLGYSPRVRARSQKPKMRNWAELGDQPK----IQGFVGFKAGMSHIVMVDDRPHS 61
Query: 225 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSE-DCRRRFYKNWYX 401
EI VTI+E P M G+ Y ++P+G + + W + + KN Y
Sbjct: 62 ATEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAWISDLKMLESLTHLPKNGYK 121
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
EL +K + D + V+ V +++ + +K +ME +
Sbjct: 122 TDEQLAKIA------ELVKKGVVADLR-------VMTVTLTSEVSGIP--KKVPELMENR 166
Query: 582 LNGGTIEDKVKWAREHLEKPIPVRFCVCP 668
+ GG + + ++A+ + K + ++ P
Sbjct: 167 IAGGDMAKRFEFAKSLMGKAVGIKDVFAP 195
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 73.7 bits (173), Expect = 5e-12
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 41/244 (16%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFP------------------KDDPSKPVHLTAF 167
K SAPR GS+G P+KR+ + +++++P K KPV L +
Sbjct: 5 KYSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV-LLGY 63
Query: 168 IGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGY-IETPHGLRALLTV 344
+ YKAGM+H + DRP + + KEI VT+++ PP++ +G+ GY I HGL + V
Sbjct: 64 VAYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLSFGEV 123
Query: 345 W---AEHMSEDCRRRFYKNWYXXXXXXXXXXXXXW--------------QDELGRKSIEK 473
W E + E + + N + E G K +E
Sbjct: 124 WRSPVEALKELYEKIYSDNPFINLGAKDIVRKYLKGLRKVNPGLVKPEPHSEYGFKFLEN 183
Query: 474 DFKKMIRYCSV-----VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEK 638
++K+ + +RVIA T L +KK I+EI++ GGT+ +++ +A + L
Sbjct: 184 NWKEKLERLKAAELADIRVIASTIPVLSGIGKKKPEIIEIKIGGGTLSERIDYAEKLLGN 243
Query: 639 PIPV 650
+ V
Sbjct: 244 YVTV 247
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 66.5 bits (155), Expect = 8e-10
Identities = 36/113 (31%), Positives = 61/113 (53%)
Frame = +3
Query: 51 APRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKI 230
APR GSMGF+P+KR+ R ++K +PK + KP+ AF YK GMTH + I
Sbjct: 8 APRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTI-------LNI 57
Query: 231 NKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 389
N + + VT++E P ++ +G Y + L+ + +++ + + R+ K
Sbjct: 58 NGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK 110
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 62.9 bits (146), Expect = 9e-09
Identities = 39/104 (37%), Positives = 50/104 (48%)
Frame = -3
Query: 650 NRDRFLQMFSGPFHFVLDGTTVKLDFHNVXXXXXXXXXXXXSVGNDSYNTTVADHLLEIF 471
NR+ F ++F GP +FV DGTTV LDF V V DS N +V +
Sbjct: 70 NRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLLRQWSLLDLGVSQDSDNRSVLLDSGQFS 129
Query: 470 FY*FASKLILPFLTGFSESLLLAFVPVFVEATSTVFRHMLRPDS 339
F F + F F E LL F+PV VE++S F + PDS
Sbjct: 130 FNLFGVSGV--FTRVFGEGFLLGFIPVLVESSSDFFTQVFSPDS 171
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +3
Query: 57 RXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINK 236
R GSM +YP+ R++ +++++P + S PV + F G+K GMTHV R S
Sbjct: 8 RRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVTAG 65
Query: 237 KEIVEAVTIIETPPMVCVGVVGYIETPHG-LRALLTVWAEHMSED 368
+ I VT+IE PP+ +G+ Y E G + + W +++ ++
Sbjct: 66 QPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVYEKWTQNLDKE 110
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/109 (30%), Positives = 58/109 (53%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K S PR GS+ + P+ R+R +++ +P+ +P L A G+KAG +V DR
Sbjct: 5 KFSQPRRGSLAYSPRGRARSMEARIRGWPERQ-GEP-RLLAHAGFKAGCIQIVSIDDREH 62
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED 368
+ K++V T++ TPP+ +G+ GY + +G V+AE + +
Sbjct: 63 TPNAGKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPRE 111
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 57.6 bits (133), Expect = 4e-07
Identities = 34/101 (33%), Positives = 51/101 (50%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K PR GS+GF PKKRS R K + + +++ F K THV+R +
Sbjct: 5 KFEHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRICNIVS 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTV 344
SK + I++ VT++E PP+ VG+ Y + L L T+
Sbjct: 65 SKSYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTI 105
Score = 40.3 bits (90), Expect = 0.057
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 652 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL-HWT 798
+S+F + ++ID I SRW LPRKTH+GL K +C+ WT
Sbjct: 190 NSIFHENDIIDAIGITKGHGTKGVVSRWGITRLPRKTHRGLRKVACIGPWT 240
>UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130041A08
product:weakly similar to 60S RIBOSOMAL PROTEIN L3; n=1;
Mus musculus|Rep: 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130041A08
product:weakly similar to 60S RIBOSOMAL PROTEIN L3 - Mus
musculus (Mouse)
Length = 109
Score = 39.9 bits (89), Expect = 0.075
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 102 HRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 239
HR + K FPK+D K HL F+ +A MT+ V E +R G K +K
Sbjct: 8 HRIQAKDFPKEDLPKSAHLIVFLVSRAVMTYFVWEINRSGPKWTRK 53
>UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2;
Clostridiaceae|Rep: Purine catabolism PurC-like -
Clostridium oremlandii OhILAs
Length = 551
Score = 35.5 bits (78), Expect = 1.6
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +3
Query: 501 SVVRVIAHTQMKLLKQRQKKAH--IMEIQLNGGTIEDKVKWAREHLEKPIPVR 653
SV + I + Q LL QR +K H +M + L GG+IED + RE+L P+ ++
Sbjct: 126 SVFKEIFNKQTSLL-QRLEKVHEQLMNVVLEGGSIEDIGRVTRENLRNPLIIK 177
>UniRef50_A5GTH3 Cluster: Possible biopolymer transport protein;
n=1; Synechococcus sp. RCC307|Rep: Possible biopolymer
transport protein - Synechococcus sp. (strain RCC307)
Length = 188
Score = 35.1 bits (77), Expect = 2.1
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +2
Query: 572 GNPT*RWYHRGQSEMGQRTSGETYPCSILCLPXMK*LTALVSPRAKDTKVSLLVGTQXTY 751
G+PT R + ++++ + +S P S M+ LTA P A+ ++ L++ +Q
Sbjct: 26 GSPTDRRWRLVENQLLEGSSPTGVPTSSPVGHLMRQLTAADGPAARQLELQLILQSQAAA 85
Query: 752 PVRHTRVLRKVACIGP 799
R R+L A +GP
Sbjct: 86 MARGERILEAAAALGP 101
>UniRef50_Q69NC6 Cluster: Putative uncharacterized protein
OJ1742_G01.32; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1742_G01.32 - Oryza sativa subsp. japonica (Rice)
Length = 100
Score = 35.1 bits (77), Expect = 2.1
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 236 ERDRGGCHHHRDSSDGLCRCCWIH*DPSWT 325
E DRG CHH+ S GLCR C + P+ T
Sbjct: 36 EGDRGCCHHYLTGSPGLCRRCPLRAHPAAT 65
>UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1205
Score = 34.3 bits (75), Expect = 3.7
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 87 KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH--VVREPDRPGSKINKKEIVEAVT 260
K +++ K+K +++ K + AFI A ++ +R DR ++N I + T
Sbjct: 19 KANKKKAAKLKKLEQNEALKGRNPKAFISQAAYASNRLTIRNLDREAKRVNLPVIDRSGT 78
Query: 261 IIETPPMVCVGVVG 302
+ETPP V + VVG
Sbjct: 79 AVETPPYV-IAVVG 91
>UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1;
Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
protein - Sulfurovum sp. (strain NBC37-1)
Length = 135
Score = 33.9 bits (74), Expect = 4.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 438 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 593
WQD K I+KD+ + YC +R+ H +L ++ K HI+ + G
Sbjct: 29 WQDNSDAKYIQKDWNGAMLYCRQLRLAGHNDWRLPSIKELK-HILSTEPRDG 79
>UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to
ENSANGP00000006197; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000006197 - Nasonia
vitripennis
Length = 1307
Score = 33.5 bits (73), Expect = 6.5
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -2
Query: 414 PSSCICTSFCRSDVDSLQTYAPPRQSKERVVHEGSQCIQQHRHKPSEESR 265
PS+ I T SD++ L P QS V+ +GS+ HR K SEE R
Sbjct: 840 PSASINTKKYESDIEILSN---PSQSSIEVLDDGSKSTTPHRKKSSEERR 886
>UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 253
Score = 33.5 bits (73), Expect = 6.5
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +3
Query: 450 LGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREH 629
L RKSIE + + IR+ +V I +K++++++ + E +L GT + + A
Sbjct: 135 LARKSIEYNTYQSIRFKTVFPDIVEENIKVIEEKKNNQNEKEDELLAGTKKQEDAIANAA 194
Query: 630 LEKPIPVRFCVCP 668
EKPI + + P
Sbjct: 195 KEKPISLEEILDP 207
>UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsis
invicta virus 1|Rep: Structural polyprotein - Solenopsis
invicta virus 1
Length = 1137
Score = 33.1 bits (72), Expect = 8.6
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 281 HRRSLDDGDSLHDLFLVDF*TGTVRFSNHVGHTGLITDKSSQMNRFARVV 132
HRR + ++ D+ LVD T++ VG GLITD +S ++ A V
Sbjct: 475 HRRDVTAARAIADMILVDERDATMQVQAEVGGQGLITDIASTVSAVAGAV 524
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,988,183
Number of Sequences: 1657284
Number of extensions: 16889744
Number of successful extensions: 38566
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 37087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38527
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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