Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_A12
(823 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 350 2e-96
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 350 2e-96
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 350 2e-96
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 336 2e-92
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 336 2e-92
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 227 2e-59
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 206 3e-53
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 350 bits (860), Expect = 2e-96
Identities = 155/203 (76%), Positives = 175/203 (86%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR GSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG
Sbjct: 16 KFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPG 75
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 76 SKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYK 135
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQ
Sbjct: 136 SKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQ 195
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
LNGG+IEDKVKWAREHLEKPI V
Sbjct: 196 LNGGSIEDKVKWAREHLEKPIQV 218
Score = 52.4 bits (120), Expect = 7e-07
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 655 SVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
+VF Q EMIDC+ SRWHT LPRKTHKGL K +C+
Sbjct: 220 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 265
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 252 PRKTHKGLRKVACIGAWHP 270
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 350 bits (860), Expect = 2e-96
Identities = 155/203 (76%), Positives = 175/203 (86%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR GSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG
Sbjct: 5 KFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 65 SKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQ
Sbjct: 125 SKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQ 184
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
LNGG+IEDKVKWAREHLEKPI V
Sbjct: 185 LNGGSIEDKVKWAREHLEKPIQV 207
Score = 52.4 bits (120), Expect = 7e-07
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 655 SVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
+VF Q EMIDC+ SRWHT LPRKTHKGL K +C+
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 241 PRKTHKGLRKVACIGAWHP 259
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 350 bits (860), Expect = 2e-96
Identities = 155/203 (76%), Positives = 175/203 (86%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR GSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG
Sbjct: 5 KFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 65 SKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQ
Sbjct: 125 SKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQ 184
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
LNGG+IEDKVKWAREHLEKPI V
Sbjct: 185 LNGGSIEDKVKWAREHLEKPIQV 207
Score = 52.4 bits (120), Expect = 7e-07
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 655 SVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
+VF Q EMIDC+ SRWHT LPRKTHKGL K +C+
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 241 PRKTHKGLRKVACIGAWHP 259
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 336 bits (827), Expect = 2e-92
Identities = 148/194 (76%), Positives = 168/194 (86%)
Frame = +3
Query: 69 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 248
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 249 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 428
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 429 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 608
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 609 VKWAREHLEKPIPV 650
VKWAREHLEKPI V
Sbjct: 181 VKWAREHLEKPIQV 194
Score = 52.4 bits (120), Expect = 7e-07
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 655 SVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
+VF Q EMIDC+ SRWHT LPRKTHKGL K +C+
Sbjct: 196 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 241
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 228 PRKTHKGLRKVACIGAWHP 246
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 336 bits (827), Expect = 2e-92
Identities = 148/194 (76%), Positives = 168/194 (86%)
Frame = +3
Query: 69 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 248
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 249 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 428
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 429 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 608
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 609 VKWAREHLEKPIPV 650
VKWAREHLEKPI V
Sbjct: 181 VKWAREHLEKPIQV 194
Score = 52.4 bits (120), Expect = 7e-07
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 655 SVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
+VF Q EMIDC+ SRWHT LPRKTHKGL K +C+
Sbjct: 196 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 241
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 228 PRKTHKGLRKVACIGAWHP 246
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 227 bits (554), Expect = 2e-59
Identities = 99/119 (83%), Positives = 108/119 (90%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR GSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPG
Sbjct: 5 KFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 398
SKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 65 SKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 206 bits (503), Expect = 3e-53
Identities = 90/108 (83%), Positives = 99/108 (91%)
Frame = +3
Query: 69 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 248
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 249 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 392
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,686,194
Number of Sequences: 53049
Number of extensions: 807657
Number of successful extensions: 1687
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -