Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_A12
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 311 5e-85
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 311 5e-85
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 311 5e-85
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 311 5e-85
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 248 4e-66
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 248 4e-66
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 115 5e-26
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 115 5e-26
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.7
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 5.3
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 29 5.3
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 28 9.3
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 311 bits (763), Expect = 5e-85
Identities = 137/203 (67%), Positives = 164/203 (80%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR G MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 5 KFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 65 SKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ
Sbjct: 125 SKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQ 184
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
+NGGTIE KV WAREHLEK + V
Sbjct: 185 VNGGTIEQKVDWAREHLEKQVQV 207
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
D+VFAQ EMID I SRWHT LPRKTHKGL K +C+
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 241 PRKTHKGLRKVACIGAWHP 259
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 311 bits (763), Expect = 5e-85
Identities = 137/203 (67%), Positives = 164/203 (80%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR G MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 5 KFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 65 SKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ
Sbjct: 125 SKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQ 184
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
+NGGTIE KV WAREHLEK + V
Sbjct: 185 VNGGTIEQKVDWAREHLEKQVQV 207
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
D+VFAQ EMID I SRWHT LPRKTHKGL K +C+
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 241 PRKTHKGLRKVACIGAWHP 259
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 311 bits (763), Expect = 5e-85
Identities = 137/203 (67%), Positives = 164/203 (80%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR G MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 5 KFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 65 SKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ
Sbjct: 125 SKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQ 184
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
+NGGTIE KV WAREHLEK + V
Sbjct: 185 VNGGTIEQKVDWAREHLEKQVQV 207
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
D+VFAQ EMID I SRWHT LPRKTHKGL K +C+
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 241 PRKTHKGLRKVACIGAWHP 259
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 311 bits (763), Expect = 5e-85
Identities = 137/203 (67%), Positives = 164/203 (80%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR G MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 5 KFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 65 SKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQ 581
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ
Sbjct: 125 SKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQ 184
Query: 582 LNGGTIEDKVKWAREHLEKPIPV 650
+NGGTIE KV WAREHLEK + V
Sbjct: 185 VNGGTIEQKVDWAREHLEKQVQV 207
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
D+VFAQ EMID I SRWHT LPRKTHKGL K +C+
Sbjct: 208 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 241 PRKTHKGLRKVACIGAWHP 259
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 248 bits (607), Expect = 4e-66
Identities = 109/164 (66%), Positives = 129/164 (78%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR G MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 5 KFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 65 SKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 533
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 125 SKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 658 VFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
V A +MID I SRWHT LPRKTHKGL K +C+
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 193 PRKTHKGLRKVACIGAWHP 211
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 248 bits (607), Expect = 4e-66
Identities = 109/164 (66%), Positives = 129/164 (78%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 221
K SAPR G MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PG
Sbjct: 5 KFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPG 64
Query: 222 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYX 401
SK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 65 SKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAK 124
Query: 402 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 533
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 125 SKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 658 VFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
V A +MID I SRWHT LPRKTHKGL K +C+
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 193 PRKTHKGLRKVACIGAWHP 211
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 115 bits (276), Expect = 5e-26
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +3
Query: 438 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 617
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 618 AREHLEKPIPV 650
AREHLEK + V
Sbjct: 99 AREHLEKQVQV 109
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
D+VFAQ EMID I SRWHT LPRKTHKGL K +C+
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPK 131
K SAPR G MGF PKKRSR +RG++KAF K
Sbjct: 5 KFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 143 PRKTHKGLRKVACIGAWHP 161
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 115 bits (276), Expect = 5e-26
Identities = 50/71 (70%), Positives = 61/71 (85%)
Frame = +3
Query: 438 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 617
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 618 AREHLEKPIPV 650
AREHLEK + V
Sbjct: 99 AREHLEKQVQV 109
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DSVFAQXEMIDCIXXXXXXXXXXXXSRWHTXNLPRKTHKGL-KESCL 789
D+VFAQ EMID I SRWHT LPRKTHKGL K +C+
Sbjct: 110 DTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 42 KXSAPRXGSMGFYPKKRSRRHRGKVKAFPK 131
K SAPR G MGF PKKRSR +RG++KAF K
Sbjct: 5 KFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 752 PVRHTRVLRKVACIGPWHP 808
P + + LRKVACIG WHP
Sbjct: 143 PRKTHKGLRKVACIGAWHP 161
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 270 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 398
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 251 GCHHHRDSSDGLCRCCWIH*DPSWTTRSFDCLGGAYV*RLSTSLLQKLVQMQEEGF 418
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -2
Query: 696 DTNAVNHFXLGKHRIEQG*VSPDVL 622
D+N +NHF + KH++EQ + P+ +
Sbjct: 467 DSNVINHFAVTKHQMEQLDLRPETV 491
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 553 KRRLTLWKSNLTVVPSRTK*NGPENIWRNLSLFDS 657
K RL L K +V S K GP+ W N+ L ++
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHET 507
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,140,639
Number of Sequences: 27780
Number of extensions: 406251
Number of successful extensions: 1008
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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