Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_A10
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0947 + 32999767-33000300,33000363-33001519,33001618-33002113     29   3.5  
08_02_0555 + 18574934-18575271,18575726-18576095,18576864-18576959     29   6.2  
02_05_0600 - 30273080-30274692,30274709-30274949                       29   6.2  

>02_05_0947 + 32999767-33000300,33000363-33001519,33001618-33002113
          Length = 728

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 188 IRRAIHGAGGSFDARIFRVGSWKPPGVE 105
           +RR +   GGS DA ++ VG   PPG +
Sbjct: 635 VRRTVRNVGGSVDA-VYTVGGVPPPGTQ 661


>08_02_0555 + 18574934-18575271,18575726-18576095,18576864-18576959
          Length = 267

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -1

Query: 209 SSARGNVIRRAIHGAGGSFDARIFRVGSWKPPGVE*HTYTLYPRALALHGT 57
           ++ARG  +R A+ GAG           SW  P +  H     P A   HGT
Sbjct: 217 AAARGMAVRAAVGGAGSPRGCCTSTFPSWLKPSINGHK-AQGPTAQPKHGT 266


>02_05_0600 - 30273080-30274692,30274709-30274949
          Length = 617

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 ASNDPPAPCIARRITLPRAELCFHYQIFGMYT*TNR 255
           +++ P    + RR+ LP A L F   + G+Y  T+R
Sbjct: 210 STSSPTGRLVCRRLVLPPARLAFMPPLLGVYVFTDR 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,579,016
Number of Sequences: 37544
Number of extensions: 417792
Number of successful extensions: 826
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)